Sequence 1: | NP_730301.3 | Gene: | CG42816 / 39977 | FlyBaseID: | FBgn0261998 | Length: | 1459 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038957107.1 | Gene: | Abca16 / 293444 | RGDID: | 1563534 | Length: | 1680 | Species: | Rattus norvegicus |
Alignment Length: | 1588 | Identity: | 467/1588 - (29%) |
---|---|---|---|
Similarity: | 762/1588 - (47%) | Gaps: | 240/1588 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 YLADGSYPLYKTGFLAVQQALSQ-VHIKHKCKEFNKTQGDI-----KFPPIKDLPSPPIFKSDNS 60
Fly 61 STLQDVGIMIIVIIIF-FVVVSLTKSIVEEKELQLKVTLNLMGVGSCLQWVAWYIQTF-----II 119
Fly 120 FLIGSSIITLFWKLV----LPNSEISFMPFTHWSMALFVLLV-LSHCTICFSFLMSSLISTTYRI 179
Fly 180 SLVTFLALIATYLPF---------LILHSK--GCSEGLNVFLSLFLLSGLQVLVVGICMWEDYGE 233
Fly 234 GLQWGNLFETSWPGGTLSVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQPWHFPCTRCCSTE 298
Fly 299 SLLPYSRLFN----RIFGIYSAAPDEERPDLQLI----EPDPVDKIAGVQIRGLSKTFGKMEVVK 355
Fly 356 NVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGFDIRQERRQAQRCIGLCPQQN 420
Fly 421 VLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLNLQEKKRLAARNLSGGTQRRLSVACSLC 485
Fly 486 GGVKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIG 550
Fly 551 SLPFLKKQVDASCLITCEARKRCDLEKLTSLISRHV-GTIQPFSIKGRDVCYKLPLSKSKYFSSL 614
Fly 615 FRDLESQMNILGVRGFSLSSVSLEEIFMSFGAEDLNSRQSGGAEKRDDDD-----------RDDD 668
Fly 669 EEN----------------EVQ----DGNVRSCKKQWRAMMTKKVMALYDNKVYFLLLLLTPIVY 713
Fly 714 YITT-LMMATKPHHSGRP--TFNISDYGVDKFTILLSVPVSKSYTEERRADSIASLIKGKLKLIV 775
Fly 776 VS-----EQIKDYVDDKWKSREGRREINFVSMAIDT-GDRTGLIGWVGPRHYVHAAPMILNLVYN 834
Fly 835 ALAQELIGPKISIEVTSVPFTLRKKEDFLISNNGDIPIYVIGY-VSIAMIIFSSAVIQERVSHMK 898
Fly 899 MLQEVSGLEMITYWLSHLAFDMVVFF-----------------------ILVLALLLPLYGYAPW 940
Fly 941 YLLLCVLFFTGLAGLIFIYFLISMLSATFLAVSMI-----LLSVIIGSLILMILGALALIFKMVY 1000
Fly 1001 VAIYVANMHPLI-------AGYNCIQKCFHYMSLCGSYISEAQNPLSENLTSDEMYCINPLAFLE 1058
Fly 1059 PRCVCVNPMTWPDMLVMLGTAIILFLLIMF-----------FEYGSCVWYRC----KGCCPYSSK 1108
Fly 1109 GS--IEDPKVSREAEKIRAMDADQIGTRALVVNGVSKKY-GCDQL-AVNNISFALKPSHCVGLLG 1169
Fly 1170 PNGAGKTTTFKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFL 1234
Fly 1235 LIWGFPSKDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVA-CGANSLICLDEPSAGVD 1298
Fly 1299 PASRRHVWTIINEVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKGMTL 1363
Fly 1364 KLVVNVQPDNMVAMLTKIEDDIYMTYP-NAELKEKYEFSGRLTFQI-SKDTSWSEIFEYVEGNRS 1426
Fly 1427 SWHLEDYSLSQPSLEDAFEEIAEERRKK 1454 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42816 | NP_730301.3 | CcmA | 336..643 | CDD:224054 | 119/307 (39%) |
ABC_subfamily_A | 339..556 | CDD:213230 | 90/216 (42%) | ||
ABC2_membrane_3 | <821..1018 | CDD:289468 | 53/232 (23%) | ||
CcmA | 1135..1450 | CDD:224054 | 122/319 (38%) | ||
ABC_subfamily_A | 1136..1354 | CDD:213230 | 93/220 (42%) | ||
Abca16 | XP_038957107.1 | rim_protein | <163..1664 | CDD:130324 | 465/1580 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X215 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.930 |