Sequence 1: | NP_730301.3 | Gene: | CG42816 / 39977 | FlyBaseID: | FBgn0261998 | Length: | 1459 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001034670.1 | Gene: | Abca3 / 27410 | MGIID: | 1351617 | Length: | 1704 | Species: | Mus musculus |
Alignment Length: | 1592 | Identity: | 457/1592 - (28%) |
---|---|---|---|
Similarity: | 763/1592 - (47%) | Gaps: | 246/1592 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 DGSYPLY-KTGFLAVQQALSQVHIKHKCKEFNKTQGDIKFPPI----KDLPSPPIFKSDNSSTLQ 64
Fly 65 DVGIMIIVIIIFFVVVSLTKSIVEEKELQLKVTLNLMGVGSCLQWVAWYIQTFIIFLIGSSIITL 129
Fly 130 FWKLVLPNSEISFMPFTHWSMALFVLLVLSHCTICFSFLMSSLISTTYRISLVTFLALIATYLPF 194
Fly 195 LILHSKGCSEGLNVFLSLFLLSGLQVLVVG---ICMWEDYGEGLQWGNLFETSWPGGTLSVGYIL 256
Fly 257 LVMILASFLSLLLCLYLEKIRPGPYGVPQPWHF---PCTRCCSTESLL--------PYSRLFNRI 310
Fly 311 FGIYSAAPDEERPDLQLIEPDPVDKIAGVQIRGLSKTF-----GKMEVVKNVSFDMFEGQITVLM 370
Fly 371 GHNGAGKTTLISMLAGFISPTSGTALINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLF 435
Fly 436 SRLRGLRGAEVKSEVQNYLKKLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGL 500
Fly 501 DPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQVDASCLI 565
Fly 566 TCEARKRCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPLSKSKYFSSLFRDLESQMNILGVRGF 630
Fly 631 SLSSVSLEEIFMSFG-----AEDLNSRQSGGA----EKRDDDDRDDD----------------EE 670
Fly 671 NEV----QDGNVRSCKKQWRAMMTKKVMALYDNKVYFLLL--LLTPIVYYITTLMMATKPHHSGR 729
Fly 730 PTF-------NISDYGVDKFTILLSVPVSKSYTEERRADSIASLIKGKLKLIVVSEQIKDYVD-D 786
Fly 787 KWKSRE------------------GRREINFVSMAI-DTGDRTGLIGWVGPRHYVHAAPMILNLV 832
Fly 833 YNALAQELIGPKISIEVTSVP---FTLRKKEDFLISNNG----DIPIYVIGYVSIAMIIFSSAVI 890
Fly 891 QERVSHMKMLQEVSGLEMITYWLSHLAFDMVVFFI-----LV------------------LALLL 932
Fly 933 PLYGYAPWYLLLCVLFFTGLAGLIFIYFLI-SMLS--ATFLAVSMILLSVIIGSLILMILGALAL 994
Fly 995 IFKMVYVAIYVANMHPLIAGYNCIQKC------FHYMSLCGSYISEAQNPLSENLTSDEMYCINP 1053
Fly 1054 LAFLEPRCVCVNPMTWP-----DMLVMLGTAIILFLLIMFFEYGSCVWYRCKGCCPYSSKGSI-- 1111
Fly 1112 ---------EDPKVSREAEKIRAMDADQIGTRALVVNGVSKKYGCDQ----LAVNNISFALKPSH 1163
Fly 1164 CVGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQ 1228
Fly 1229 LLKVFLLIWGFPSKDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVA-CGANSLICLDE 1292
Fly 1293 PSAGVDPASRRHVWTIINEVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKI 1357
Fly 1358 AKGMTLKLVVNVQPDNMVAMLTKIEDDIYMTYPNAELKEK------YEFSGRLTFQISKDTSWSE 1416
Fly 1417 IFEYVEGNRSSWHLEDYSLSQPSLEDAFEEIA 1448 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42816 | NP_730301.3 | CcmA | 336..643 | CDD:224054 | 124/311 (40%) |
ABC_subfamily_A | 339..556 | CDD:213230 | 96/221 (43%) | ||
ABC2_membrane_3 | <821..1018 | CDD:289468 | 61/229 (27%) | ||
CcmA | 1135..1450 | CDD:224054 | 118/325 (36%) | ||
ABC_subfamily_A | 1136..1354 | CDD:213230 | 92/222 (41%) | ||
Abca3 | NP_001034670.1 | rim_protein | 1..>43 | CDD:130324 | |
rim_protein | <206..1699 | CDD:130324 | 454/1586 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 159 | 1.000 | Domainoid score | I4067 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X215 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.830 |