Protein Alignment CG42816 and Abca5

DIOPT Version :10

• Sequence 1: NP_730301.3
• Gene: CG42816 / 39977
• FlyBaseID: FBgn0261998
• Length: 1459
• Species: Drosophila melanogaster
• Sequence 2: NP_671752.2
• Gene: Abca5 / 217265
• MGIID: 2386607
• Length: 1642
• Species: Mus musculus
• Alignment Length: 592
• Identity: 112/592 - (18%)
• Similarity: 191/592 - (32%)
• Gaps: 200/592 - (33%)

  Fly   286 LEHTPEKRKEQRVLAEI------------------HPQPAVADAVLPPLD---LAALLDAPILGE 329
            :|...|:....|:|||:                  :...::.|.:...|:   |.|..:.|..||
Mouse   185 VEDLKEQESVSRILAELLENQEEFFESEDEDISNTNDYSSINDQITELLEEEKLDACEELPRDGE 249

  Fly   330 --PSRQLEQTVTTVPS----LDDFSLTPSKANLIDLELMAPAADGPFATDDYLVRHASNF----- 383
              ||....:.....||    :...|:.|..|::|...:.|       |.:.:|:...::.
Mouse   250 DGPSSLSPKHAQVAPSSSSHIASISILPGSADIIQRTIRA-------AVEQHLLDLQTSIDKELG 307

  Fly   384 SYAPTLNSILEESPIKAAAAFLPGKLPLPKTP-------------------PSVTKSGRKLKRLG 429
            ||.   :.:|:..||.       |..|..|||                   |.||:.|...:...
Mouse   308 SYE---SQVLDSKPIH-------GNSPTLKTPGPEDHEDVQSESEAETETLPEVTEEGLPSENSE 362

  Fly   430 TNSGSAARASVSPKAT-----------------RRL--HG------------AQPHNCRL----K 459
            .:.||...:.:..:::                 .||  |.            .:|.:|.|    :
Mouse   363 ESQGSQLSSPIMEESSGMDLDTETLIETESLGAERLEKHSDYEQMDQTDVTTCEPDDCDLNANSE 427

  Fly   460 TAQPYSFCGCEYINILHQLSMRNPDALETLLDYLADTD-----------LVQVVRVSRGWKAIIQ 513
            :.:|.|  |.:.......|.....|.:...:.:..:|:           .:..:.:......::.
Mouse   428 STEPAS--GFQSSTRSMFLEGEQEDPMPVFMSWQEETESGEAQLSPLAGRMMPLPLEEDAHPLLA 490

  Fly   514 NHKKSWRRLQRFLKQQEEHKENCHGSRWENGSFASSLNAGSSQLGTALPELLSGTFGKDSNAGGG 578
            .....:...||||  |::|         :..|...:|:.|..:..:     ||   .|||..|..
Mouse   491 RRFLDFGHSQRFL--QQDH---------DASSSTKTLSCGRPRRAS-----LS---SKDSVKGDN 536

  Fly   579 LGTRLPFKVCN------TLDNSQASAGNASFAHGSFANSPPVSPSMRKFVTN-QKIASHLKQSEQ 636
            :..:|..|:.|      ..|.......|...:|...|    ..|.:.|::|: .||...||....
Mouse   537 VSQQLTKKLQNLKKKIKQFDEQFEKERNYKPSHADKA----ADPKVLKWMTDLTKIRKQLKGRHH 597

  Fly   637 LRP-----------CPRCEQPS-------RIILSR--ASKSS-----------------KSRSSA 664
            |.|           ..||...|       .|.|||  ||:.|                 :.||:.
Mouse   598 LLPKGSLRHQAVLQSYRCHSSSSSVPNTPHITLSRPLASRQSPHFYAKHKAESELTPQTRPRSNT 662

  Fly   665 RCSAVGARLEKSYTLPDPETVTASGHRHSGSNNTHSSTIETVRSSNLSTDTITTTHRNNNHYGEP 729
            ...:.|:.|::| ...|...:.|.|||     .|...|:|.::.       ...:.|:.:.:
Mouse   663 LPKSFGSTLDQS-AYEDTVEIEARGHR-----PTREETLELIQQ-------CIQSKRDEDGW--- 711

  Fly   730 SPERVRK 736
             ||.|||
Mouse   712 -PEDVRK 717

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42816	NP_730301.3	rim_protein	<81..1451	CDD:130324	112/592 (19%)
Abca5	NP_671752.2	rim_protein	<84..1618	CDD:130324	112/592 (19%)