DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42816 and abt-4

DIOPT Version :9

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:NP_503175.1 Gene:abt-4 / 178559 WormBaseID:WBGene00000022 Length:1802 Species:Caenorhabditis elegans


Alignment Length:1612 Identity:442/1612 - (27%)
Similarity:744/1612 - (46%) Gaps:279/1612 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DGSYPLY-KTGFLAVQQALSQVHIKHKCKEFNKTQGDIKFPPIKD------LPSPPIFKSDNSST 62
            ||..|.| :.||:.||:|: .|.|....     |..|.:..|:.|      .|.|     ..|:.
 Worm   260 DGGSPGYWQEGFMTVQRAV-DVAITEII-----TGEDAQLTPLLDSYQVSRFPFP-----GYSTK 313

  Fly    63 LQDVGIMIIVIIIFF----VVVSLTKSIVEEKELQLKVTLNLMGVGSCLQWVAWYIQTFIIFLIG 123
            :.::|...:.:|:.|    .|:.:.:::|.|||.:||..:.:||:...:.|||.:|..:......
 Worm   314 IIEIGAFFMPVIVIFSFMTSVIYIVRAVVVEKEDRLKEYMRVMGLSQFINWVAHFIINYAKLTFA 378

  Fly   124 SSIITLFWKLVLPNSEISFMPFTHWSMALFV-LLVLSHCTICFSFLMSSLISTTYRISLVTFLAL 187
            ..::|:....|...|:::.|         || |::.:...:.|:|::||.:::....:|::.:..
 Worm   379 VIVLTILMHFVALKSDMTLM---------FVFLMIYAFDVVYFAFMISSFMNSATSATLISVVFW 434

  Fly   188 IATYLPFLILHSKGCSEGLNVF-LSLFLLS----------GLQVLVVGICMWEDYGEGLQWGNLF 241
            :..|..:....|   .:..|.: |...|::          |||:|..    :|...:||:||.||
 Worm   435 MLLYFWYAFFSS---IDQTNPYPLGYRLINCINPDIALNYGLQLLAA----YETQADGLKWGELF 492

  Fly   242 ETSWPGGTLSVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQ-PWH-------FPCTRCCSTE 298
            ....|...|:.|:.|:.:|:...:.::|..|:|.:.||..|||| ||.       ||.:...:.:
 Worm   493 TPPSPDNNLTFGHALIALIVDGIIMIILTWYIEAVIPGGEGVPQKPWFFVLPSYWFPNSGSKTVD 557

  Fly   299 SLLPYSRLFNRIFGIYSAAPDEERPDLQLIEPDPVDKIAGVQIRGLSKTF--------------- 348
            |    |..|.:|          :..|...:|.:|.|.|..:.:..|:||:               
 Worm   558 S----SDQFQQI----------QYADHVKLEKEPTDLIPTINVVNLTKTYGTSFFKKLFDCKFGK 608

  Fly   349 -GKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGFDIRQERRQAQRC 412
             |:...|.|::..|:.||.|||:|||||||:|..|||.|..||:||:|.:|.||||....:.:|.
 Worm   609 SGEKRAVSNLNLKMYPGQCTVLLGHNGAGKSTTFSMLTGVASPSSGSAYVNDFDIRTSLPKIRRE 673

  Fly   413 IGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLNLQEKKRLAARNLSGGTQRR 477
            :|||||.|.||..::.:.|::.|::|:  .......|.:..|.:|.:..|....|..||||.:|:
 Worm   674 MGLCPQYNTLFGFMTVMEHLEFFAKLK--ERTWDPEEAREILARLRIDFKADFMAGALSGGQKRK 736

  Fly   478 LSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVIIS 542
            ||:|.:|.||.:|::.|||::|:||.||.|.|.||...||..|||||||.:::.::||||:.|::
 Worm   737 LSLAIALIGGSEVVMLDEPTSGMDPGARHETWTLIQREKERRTILLTTHFMEEADLLGDRIAIMA 801

  Fly   543 DGQLRCIGSLPFLKKQVDASCLITC--EARKRCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPL 605
            .|||.|.||..|||:|......:|.  :.....|:.|.|.:|..::.....||..|::..|.|..
 Worm   802 HGQLECCGSPMFLKQQYGDGYHLTIVYDTTSTPDVSKTTDIIREYIPEAHVFSYIGQEATYLLSA 866

  Fly   606 SKSKYFSSLFRDLESQMNILGVRGFSLSSVSLEEIFMSFG--AEDLNSRQSGGAEKRDDDDRDDD 668
            :....|..||::||......|:..|.:|..::||:|:..|  |::..:.:.|       .:.|..
 Worm   867 THRPIFPKLFKELEDHQTQCGITSFGVSITTMEEVFLKVGHTADERYNYEHG-------IENDIS 924

  Fly   669 EENEVQDGNVRSCKKQWR------------AMMTKKVMALYDNKVYFLLLLLTPIVYYITTLMMA 721
            |..|..|..::..:.|.|            ||..|:.:..:.....||..|:.|:.|.:  ||:.
 Worm   925 EMIEKDDPILQDLRAQVRVTGFTLQMQHAKAMFYKRAIFFFRKWTQFLPQLVFPVAYLV--LMVF 987

  Fly   722 TK----------PHHSGRPTFN--------ISDYGVDKFTILLSVPVSKSYTEERRADSIASLIK 768
            |.          |.......|:        :||.|  .:..||.           .:.:::|:::
 Worm   988 TSQVLPSVKEQDPQTISLAPFSDTKKAGHLVSDSG--NYVTLLG-----------GSQNLSSMVQ 1039

  Fly   769 GKLKLIVVSEQIKDYVDDKWKSREGRREINFVSMAID----TGDRT-GL---IGWVGPRHYVHAA 825
            |.:..:.|::.:.|...            |.....:|    .|.|| ||   :|:| |..:..:.
 Worm  1040 GTVTQLGVTQTVVDITS------------NVEKFIMDQTNAMGSRTFGLHYALGFV-PSMFNFST 1091

  Fly   826 PMI--LNLVYNALAQELIGPKISIEVT-SVPFTLRKKEDFLI-----------------SNNGDI 870
            ..:  |...:|...  |..|.::|..| |:..:.::|:.:..                 :|..|.
 Worm  1092 VSVPSLKTFFNNFG--LYTPALAITFTDSMILSQKQKKQYSFTAVNHPLPPSTQDTLKNTNRSDG 1154

  Fly   871 PIYVIGY---VSIAMII--FSSAVIQERVSHMKMLQEVSGLEMITYWLSHLAFDMVVFFILVLA- 929
            ..::|.|   ||.|:.:  :|..:|.||....|.:|.:||:....:||:...:|...|.|.:|. 
 Worm  1155 AAFLIAYGLIVSFAVCVAGYSQFLITERKKKSKHMQLLSGIRPWMFWLTAFIWDAAWFVIRILCF 1219

  Fly   930 ------LLLPLYGYAPWYLLLCVLFFT--GLAGLIFIY---FLISMLSATFLAVSMI-LLSVIIG 982
                  ..:..|.:....:|:..|.|.  |...|.|.|   |........|:.|:|. :|:.:||
 Worm  1220 DAIFYIFNITAYTHDFGVMLILTLSFLLYGWTALPFTYWFQFFFESAPKGFMMVTMYHILTGMIG 1284

  Fly   983 SLILMILGALALIFKMVYVAIYVANMHPLIAGYNCIQKCFHYMSLCGSYISEAQNPLSEN----L 1043
            |:.:.|:...:.:......:|..|.:.|.   ||               ||:......:|    :
 Worm  1285 SIAVPIISQTSSLDAGYLWSIIFAWLFPT---YN---------------ISQIATVTFQNENVRI 1331

  Fly  1044 TSDEMYCINPL-AFLEPRCVCVNPMTWPDMLVMLGT-----AIILFLLIMFFEYGSCVW------ 1096
            ...::.|..|: ..:...|...:...:.|.::.:|.     ..::||.:..|.|  .:|      
 Worm  1332 ACKKLDCTIPMFKAVTACCGTASERLYVDNVLFVGNRKGILVYVIFLAVQGFIY--WIWVFMREN 1394

  Fly  1097 ---------YRCKGCCPYSSKGSIEDPKVSREAEKIRAMDADQIGTR------------ALVVNG 1140
                     .||:     .:...|.|...:.:.::....|:|.|..:            |||.|.
 Worm  1395 DQFTKLFALIRCR-----KADNPIWDITDTDKVDERDVEDSDVIAEKSVVQRLANNNKTALVSNN 1454

  Fly  1141 VSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISGYSMRMKRN 1205
            :.|.|| :..||..::|.:....|.||||.||||||:||:|:.||:||..|:.|::|:|::....
 Worm  1455 LVKWYG-NFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENSISSGDAYVNGWSVKNNWR 1518

  Fly  1206 KAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQFGFRKHLDKKITYYSG 1270
            :|....|||||.|:..:.::|.:.|.:|..|.|.|.||:.|:...:....|...:..::|..|||
 Worm  1519 EAGANTGYCPQYDAIIKEMSGEETLYMFARIRGIPEKDIPKKVNAVIHAIGIGMYASRQIKTYSG 1583

  Fly  1271 GTKRKINAAVA-CGANSLICLDEPSAGVDPASRRHVWTIINEVAQQGKAVLLTSHNMDEINALCS 1334
            |.||:::..:| .|...::.||||::||||.:||.:|.|:|.:...|.|::||||:|||..|||:
 Worm  1584 GNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNILNRLRDLGTALVLTSHSMDECEALCT 1648

  Fly  1335 KSVILVDGSIYAMGSVQHVKNKIAKGMTLKLVVNVQPDNMVAMLTKIEDDIYMTYPNAELKEKYE 1399
            :..|:|.|.....||.||:|::...|.||.:.:..:.|     ..|.:..|..|:..:.:||::.
 Worm  1649 ELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIRLKNRND-----AEKTKSTIKQTFRGSVIKEEHV 1708

  Fly  1400 FSGRLTFQISKD-TSWSEIFEYVEGNRSSWHLEDYSLSQPSLEDAFEEIAEE 1450
            .  :|.|.|.:| .|||.:||.:|...:|.:.:||||||.:||..|.|.:.:
 Worm  1709 L--QLNFDIPRDGDSWSRLFEKLETVSTSLNWDDYSLSQTTLEQVFIEFSRD 1758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 CcmA 336..643 CDD:224054 121/324 (37%)
ABC_subfamily_A 339..556 CDD:213230 96/232 (41%)
ABC2_membrane_3 <821..1018 CDD:289468 51/234 (22%)
CcmA 1135..1450 CDD:224054 121/316 (38%)
ABC_subfamily_A 1136..1354 CDD:213230 89/218 (41%)
abt-4NP_503175.1 ABC2_membrane_3 <281..523 CDD:289468 58/267 (22%)
NosY <377..524 CDD:224196 34/162 (21%)
CcmA 581..905 CDD:224054 121/325 (37%)
ABC_subfamily_A 586..815 CDD:213230 96/230 (42%)
ABC2_membrane_3 <1078..1318 CDD:289468 55/260 (21%)
ABC_subfamily_A 1450..1668 CDD:213230 89/218 (41%)
drrA 1457..1755 CDD:130256 116/305 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3135
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53524
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X215
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.830

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