DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42816 and abt-5

DIOPT Version :9

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:NP_001364572.1 Gene:abt-5 / 173081 WormBaseID:WBGene00000023 Length:1582 Species:Caenorhabditis elegans


Alignment Length:1598 Identity:410/1598 - (25%)
Similarity:678/1598 - (42%) Gaps:377/1598 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DIKFPPIKDLPSPPIFKSDNSSTLQDVGIMIIVIIIFFVVVSLTKSIVEEKELQLKVTLNLMGVG 104
            |||...|.:.        :.|...|:.|::..|.:: ..|:|:.:::|.||. .:|..|..:|:.
 Worm   181 DIKLYSITNF--------EESGFGQNFGLLFAVCML-MPVISVARALVVEKS-SVKPYLTTIGLP 235

  Fly   105 SCLQWVAWYIQTFIIFLIGSS-IITLFWKLVLPNSEISFMPFTHWSMALFVL----LVLSHCTIC 164
               .|: :|::.|:..:|.:: :|||...|.:         |:..:...:||    :...|| :.
 Worm   236 ---LWM-FYLEHFLFGVIKNTFLITLLSTLYI---------FSMDNCPTYVLAGIFMYTCHC-VS 286

  Fly   165 FSFLMSSLISTTYRISLVTFLALIATYLPFLILHSKGCSEGL-NVFLSLFLLSGLQVLVVGICMW 228
            ||.|.:|:                   |||    .|...||: .::::|.:...|.:        
 Worm   287 FSILCTSI-------------------LPF----GKRIVEGMVIIWITLIIAMHLSL-------- 320

  Fly   229 EDYGEGLQWGNLFETSW----PGGTLSVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQPWHF 289
                       .||..|    |  .|:..|.|.:.:.|:||:           .||.|.|....|
 Worm   321 -----------EFEFDWLFWVP--LLNPNYSLKLFVDATFLA-----------SGPNGTPTSALF 361

  Fly   290 PCTR--------------CCSTESLLP-------YS-------RLFNRIFGIYSA--APDEERPD 324
            ...:              .|:...|:.       |:       :.|.||.|....  :..|||.|
 Worm   362 SSKKKTLQSAAVYFGIMISCTVVMLVAAIFMEKLYTFVGHAIFKRFWRILGFSKGKRSKIEERGD 426

  Fly   325 --------LQLIEPDPVD----KIAGVQIRGLSKTFGKME-VVKNVSFDMFEGQITVLMGHNGAG 376
                    ||..|  .|:    .||.:::.||.|.:...| .|..:|.....||:::|:||||.|
 Worm   427 GVEDRSTILQCKE--TVEGRGSAIADIELSGLVKVYQNGEKAVNGLSLRAIRGQVSILLGHNGCG 489

  Fly   377 KTTLISMLAGFISPTSGTALINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGL 441
            |:|...|:.|....|.|..:|.|.|....|.:|:..||.|||.|.::..|:...|::|.:.|:|.
 Worm   490 KSTTFGMITGMHQATEGKVMIGGIDANANRAEARELIGYCPQYNPIYDELTVWEHLRLVNALKGR 554

  Fly   442 R-GAEVKSEVQNYLKKLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSAR 505
            . |::.|.:.::.||::.|.:|:...|:|||||.:|:|.|..::.||.:|::.|||:.|:|||||
 Worm   555 SGGSDFKMDAESLLKQIELTDKRNTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDPSAR 619

  Fly   506 RELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQVDASCLIT---- 566
            .::..::...|...|||||||.:|:.|.|||.:.::|.|::...||..:||::.....|:|    
 Worm   620 IDVQNMLALVKADRTILLTTHYMDEAEKLGDWIFVMSHGKMAASGSKHYLKQKYGGGMLLTLVFK 684

  Fly   567 -----CEARKR-------CDLEKLTSLISRHVGTIQPFSI----KGRDVCYKLP--------LSK 607
                 ...||.       |.....|:|:....|.:...||    |.|     ||        :.:
 Worm   685 SVHDPMRPRKSYETAYDVCKTVCSTALVKDERGQMIEISILETEKSR-----LPTLLKILESVME 744

  Fly   608 SKY----FSSLFRDLESQMNILGVRGFSLSSVSLEEIFMSFGAEDLNSRQSGGAEKRDDDDRDDD 668
            ..|    |.:|..|::.:...|.:....:|..|||::|:..|.|..:.....|.:|:  .:|.:.
 Worm   745 EDYNNPEFQALEPDIQEKCRTLELATIGVSMSSLEQVFIKIGDECDDIMNGTGVDKK--TERQEK 807

  Fly   669 EENEVQ-------DGNVRSCKKQWRAMMTKKVMALYDNKVYFLLLLLTPI----VYYITTLMMAT 722
            ....||       .|..:.....| |::.|:...||.|.|...|.::.|:    ::.:..|.:..
 Worm   808 FSTLVQYKIQQPKQGFSKLMMVVW-ALLQKRAYYLYRNPVQITLQIILPLLTLWLFAVPFLRLEP 871

  Fly   723 KPHH-SGRPTFNISDYGVDKFTILLSVPVSKSYTEERRADSIASLIKGKLKLIVVSEQIKD---Y 783
            ||.. |...:|:.|.|  ...|:||.:       |....|.:|:.:.......||.....|   |
 Worm   872 KPPKLSDIESFDPSQY--PHSTVLLQL-------ENENDDRLANYLNSFSNFEVVKVGYNDHYGY 927

  Fly   784 VDDKWKSREGRREINFVSMA----------IDTGDRTGLIGWVGPRHYVHAAPMILNLVYNALAQ 838
            :..|:.  :..:.:.|:...          |..||:.              |.:::|::  |.|.
 Worm   928 LVKKYS--QVFKTLGFIVKVNKKGDSKFYKISQGDKN--------------AAILMNII--ASAM 974

  Fly   839 ELIGPKISIEVTSVPFTLRK--------------KEDFLISNNGDIPIYVIGYVSIAMIIFSSAV 889
            .|..|    .||.:|....:              ...||..|       :...:.:|.|...|.|
 Worm   975 YLRDP----SVTKLPHVTSRVIWMNDPKIKYEGLASFFLFEN-------IFFLLVLAGIFIQSTV 1028

  Fly   890 --IQERVSHMKMLQEVSGLEMITYWLSHLAFDMVVFFILVLALLLPLYGYAPWYLLLCVLFFTGL 952
              |:|::......|.::||..|.||       .|||.               |..||        
 Worm  1029 YLIEEKICKFAHQQYLTGLSTIAYW-------GVVFL---------------WDFLL-------- 1063

  Fly   953 AGLIFIYFLISMLSATFLAVSMILLSVIIGSLILMILGALALIFKMVYVAIYVANM----HPLIA 1013
                |.:||:..:.  || :|..:|...|..::::..|.|.....:||:...:.|.    :.|:.
 Worm  1064 ----FTFFLLYTIG--FL-ISFGVLQGHIHEIVVIFYGLLFYFAPLVYLTSALINTPTRGNFLLY 1121

  Fly  1014 GYNCIQKCFHYMSLCGSYISEAQN--PLSENLTSDEM----YCINP-LAFLEPRCVCVNPMTWP- 1070
            .:.||.      .|..|.:||..|  |:.:  .|||:    ...|| :.|| ...:.:..:.:| 
 Worm  1122 MFCCIP------WLAYSIVSELHNFPPIQK--YSDEIEYGFRIFNPSIGFL-AGLMKIAALNYPK 1177

  Fly  1071 -------DMLVMLGTAIILFLLIMFFEYGSCVWYRCKGCC---PYSS------------------ 1107
                   :.|..|.|...:|..:||..:|........||.   |:..                  
 Worm  1178 SGLDKHFEHLTNLWTYEGIFFELMFLFFGGIFLTILLGCATLKPFRRACFRGTRRRSQPRERKRY 1242

  Fly  1108 KGSIEDPKVSREAEKIRAMDADQIGTRALVVNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNG 1172
            || ||..|..:|.|:: ..:.|:..| .||::|:.|.:|..: |||::|.::....|.|:||.||
 Worm  1243 KG-IESCKAVKEEEQL-VQEVDKNET-VLVIDGLVKDFGKFR-AVNDLSISVGHEECFGMLGANG 1303

  Fly  1173 AGKTTTFKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIW 1237
            |||||||.:|.|......|:..|.|:.:     .....:|||||.|:..:.::.||.|::...:.
 Worm  1304 AGKTTTFDIITGLTMPTGGSATIDGHDI-----TETIHIGYCPQFDAMLQQISCRQTLRIMAKLQ 1363

  Fly  1238 GFPS----KDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVACGAN-SLICLDEPSAGV 1297
            |:|:    .:|...|..::| ||:     |.:...|||.||||:..:|..:. :.|.||||:||:
 Worm  1364 GYPNVKEVVELVLDCVGMSD-FGY-----KLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGI 1422

  Fly  1298 DPASRRHVWTIINEVAQQGK-AVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKGM 1361
            ||.:||.:|.||:|:.:|.| :::||||:|:|..|||::..||..|.:.|:|:.|.:|::.....
 Worm  1423 DPRARREIWDIIHEMREQAKCSIVLTSHSMEECEALCTRIGILRKGEMIALGTSQSLKSQYGNTY 1487

  Fly  1362 TLKLVVNVQPD-NMVAMLTKIEDDIYMTYPNAELKEKYEFSGRLTFQI------SKDTSWSEIFE 1419
            .:.|::|...| ..|.::...|      .|:|.||..   ...||..|      ||...|||.:.
 Worm  1488 MMTLILNSLEDLESVCVIVSEE------MPDAVLKTP---ESSLTTSIVWELPKSKSDKWSEKYN 1543

  Fly  1420 YVEGNRSSWHLEDYSLSQPSLEDAFEEIAEERRKKKSN 1457
            .||......:.:||.|:|.||||.|..:.....:::::
 Worm  1544 QVEVLAKKANAKDYMLTQASLEDTFIRLITTEEEEEAS 1581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 CcmA 336..643 CDD:224054 108/340 (32%)
ABC_subfamily_A 339..556 CDD:213230 80/218 (37%)
ABC2_membrane_3 <821..1018 CDD:289468 44/216 (20%)
CcmA 1135..1450 CDD:224054 113/327 (35%)
ABC_subfamily_A 1136..1354 CDD:213230 84/223 (38%)
abt-5NP_001364572.1 rim_protein <419..1569 CDD:130324 346/1267 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53524
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.790

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