DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42816 and abt-2

DIOPT Version :10

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:NP_490949.3 Gene:abt-2 / 171782 WormBaseID:WBGene00000020 Length:2146 Species:Caenorhabditis elegans


Alignment Length:1651 Identity:414/1651 - (25%)
Similarity:727/1651 - (44%) Gaps:353/1651 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LADGSYPLYKTGFLAVQQALSQVHIKHKCKEFNKTQGDI-------KFP-PIKDLPSPPIFKSDN 59
            |.|..|..:  ||..:|:::.:..:....   |:|..::       .:| .:||..:..:|    
 Worm   613 LIDLKYITF--GFSFLQESIDRAIMSELT---NQTDANLGVYAQQEPYPCTVKDTFNVALF---- 668

  Fly    60 SSTLQDVGIMIIVIIIFFVVVS--LTKSIVEEKELQLKVTLNLMGVGSCLQWVAWYIQTFIIFLI 122
                     |.:.::|.|:..|  |.|:||.|||.::|..:..||:|..:.:::|.:.:.::..|
 Worm   669 ---------MPLFLLISFIFPSALLVKNIVYEKEQKIKEQMRAMGLGDAVHFISWGLISLVLNFI 724

  Fly   123 GSSIITLFWKLVLPNSEISFMPFTHWSMALFVLLVLSHCTICFSFLMSSLISTTYRISLVTFLAL 187
            ...||::..|:.      ....:|.:::.||||::....:|..|...|:|.:.....:..|.:..
 Worm   725 SVLIISIISKVA------KIFDYTDYTLLLFVLILFLFSSIAMSIFFSTLFTNANIATAATCVLW 783

  Fly   188 IATYLPFLILHSKGCSEGLNVFLSLFLLSGLQVLVVGIC--MWEDYG--EGLQWGNLFETSWPGG 248
            ...::||.:|.:...|......:||.    |....:|.|  :.|.:.  |...|.:|:|.:.|..
 Worm   784 FVFFIPFQLLRTDRISSPTFNRISLI----LPPTAMGHCFKLLESFNAMERATWSDLWEMNNPVL 844

  Fly   249 TLSVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQPWHFPCTRCCSTESLLPY--SRLF-NRI 310
            .:||...::::::.:.:.|:|..|:..:.||.:||.||..||.|        |.|  ..|: ||:
 Worm   845 GISVELCMIMLVVDTAVFLILAWYISAVAPGDFGVRQPLWFPFT--------LKYWAPGLYKNRV 901

  Fly   311 FGIYSAAPDEER----PDLQLIEPDPVDKIAGVQIRGLSKTF-GKMEVVKNVSFDMFEGQITVLM 370
            ..:     |:|.    |:....:.:|.:....|.|..:||.: ...:.:..::..::|||||.|:
 Worm   902 EFV-----DDEHFDTIPNSDSFDSEPTNLTLAVHINSMSKVYENGTKALDCLNLRLYEGQITGLL 961

  Fly   371 GHNGAGKTTLISMLAGFISPTSGTALINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLF 435
            |||||||||.:|:|.|..:|:||||.|...|||.:.|:.:..:|:|||.||||.||:....::||
 Worm   962 GHNGAGKTTTMSILCGLYAPSSGTAKIYQRDIRTDLRRVRDVLGICPQHNVLFSHLTVSEQLRLF 1026

  Fly   436 SRLRGLRGAEVKSEVQNYLKKLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGL 500
            :.|:|:..:|:.|:|...|..::|.||....|..||||.:|||.:..:..||.:.:|.|||:.|:
 Worm  1027 AALKGVPDSELTSQVDEILASVSLTEKANKLASTLSGGMKRRLCIGIAFIGGSRFVILDEPTAGV 1091

  Fly   501 DPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVIIS---------DGQLRCIGSLPFLK 556
            |.:||:::|:|:...|||.||||:||.:|:.:||.||:.|:|         ||:     .|.|..
 Worm  1092 DVTARKDIWKLLQRNKEGRTILLSTHHMDEADVLSDRIAILSQDFEKPDLLDGK-----RLIFQH 1151

  Fly   557 KQVDASCLI--TCEARKRCDLEKLTSL---------ISRHVGTIQPFSIKGRDVCYKLPLSKSKY 610
            ......|.|  |.::::....:.:..|         :...|.|.:|      |:...:|      
 Worm  1152 FYALLVCRINYTLKSKRTFLFQVIIPLFLLALAELFVLLQVSTARP------DLMVSMP------ 1204

  Fly   611 FSSLFRDLESQMNILG------VRGFSLSSVS-----LEEIFMSFG-----AEDL---------- 649
                  .|..:.:|:|      |..:..:..|     |..:|.|.|     |:|:          
 Worm  1205 ------PLPLETSIMGNHSDFYVNSWDTAENSTANDILHAMFSSPGTGPRCAKDVPNDLLDTMRR 1263

  Fly   650 ----NSRQSGGAEKRDDDDRDDDEENEVQDGNVRSCKKQWRAMMTKKVM-ALYDNKVY------- 702
                .:|...|..|.......|..:||.|..|:     |.....|:.:. |.|:..:|       
 Worm  1264 ELMFRNRYGFGRNKPAPGVDKDSVDNEYQCQNI-----QGEFDYTEDISNATYNAPIYCGCEDFG 1323

  Fly   703 --------------FLLLLLTPIVYYITTLMMATKPHHSGRPTFNISDYG-VDKFTILLSVPVSK 752
                          :|.|..|..::.:|           ||   |::.:. :.:|..|       
 Worm  1324 WNCTLEDWKWNETNWLRLNTTDRIFDLT-----------GR---NLTQFRLITRFAQL------- 1367

  Fly   753 SYTEERRADSIASLIKGKLKLIVVSEQIKDYVDDKWKSREGRREINFV--SMAIDTGDRTGLIGW 815
                   |::.|....|...|..|:::.:...|.....|.....|..:  ||.|...:.||    
 Worm  1368 -------ANTTAPFFLGGFSLGHVNQRAQSQADIDTSKRGWLETIKDIAQSMRIINLNTTG---- 1421

  Fly   816 VGPRHYVHAAPMI---------LNLVYNALAQEL-------------IGPKISIEVTSVPFTLRK 858
            :.|     |.|.:         ||.|.|.|.|.|             |.|...|....:...|.:
 Worm  1422 IEP-----ATPKVLDPFAQNITLNQVVNDLLQNLDVRENVKVWFNNKIWPGFPIASNILSNALLR 1481

  Fly   859 KEDFLISNNGDIPIYVIGY-------------------------VSIAMII-------FSSAVIQ 891
            :||:.|... |:.|..:.:                         ::|.:::       |:..:::
 Worm  1482 QEDYAIDPE-DLGILTMNHPMNKTISQTLDQNALKFTQALAVFRITILLLVLSMIPAGFTVYLVE 1545

  Fly   892 ERVSHMKMLQEVSGLEMITYWLSHLAFDMVVFFILVLALLLPLYGY---------APWYLLLCVL 947
            :|:.....||.|.||..:|||::...:||||:.::::.::|....:         |.::..|.:.
 Worm  1546 DRICEALHLQLVGGLRKVTYWVTSYLYDMVVYTLVIIVIMLIYLCFRVSDFTADGATFFAFLLLF 1610

  Fly   948 FFTGLAGLIFIY-----FLISMLSATFLAVSMILLSVIIGSLILMILGALA---------LIFKM 998
            |..|::.:::.|     |.::.||...:|:....:.::....::|:...:.         .:..:
 Worm  1611 FVHGMSTILYAYVFQKAFSVAALSFVLIAIGSYFVGIVCALTVIMLESLMVQDPSLIPAHTVCSI 1675

  Fly   999 VYVAIYVANMHPLIAGYNCIQKCFHYMSLCGSYISEAQN--------PLSENLTSDEMYCINPLA 1055
            |::.:...|:.  ||.:..:.  .:.:...||...:..|        ||...|..|:|       
 Worm  1676 VFLVLPQYNLG--IAIFRGLM--IYQVRAIGSNFLQQMNRPDMINQLPLPSLLAFDQM------- 1729

  Fly  1056 FLEPRCVCVNPMTWPDMLVMLGTAIILFLLIMFFEYG----------SCVWYRCKGCCPYSSKGS 1110
            .:...|:.::        |::.|..::|  ....|:|          ..:..|....|       
 Worm  1730 GIHIMCLFIH--------VIIATICLIF--SQMDEFGFVRKRERNLTDAMMLREPSTC------- 1777

  Fly  1111 IEDPKVSREAEKIRAMDADQIGTRALVVNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGK 1175
             :|..|.:|.:::.|:..|.....||:|..::|.|..:.|||..||||::|..|.||||.|||||
 Worm  1778 -DDEDVVKERQRVDAIPMDSSDNHALIVRNLAKAYNPELLAVKGISFAVEPGECFGLLGLNGAGK 1841

  Fly  1176 TTTFKMIV-----GEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLL 1235
            ||||.|:.     |..||:..|..|:..|....||  .::||||||.|:....|:.|:.||.:..
 Worm  1842 TTTFAMLTAKIRPGHGSIEMQNTRINTGSFSDVRN--FQQLGYCPQFDALNMKLSTRENLKFYAR 1904

  Fly  1236 IWGFPSKDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVACGAN-SLICLDEPSAGVDP 1299
            |.|.....::...::|......|.:.:.:.:..|||.:||::.|||..:. |||.|||||||:||
 Worm  1905 IRGIVPTQIDSIIDRLLIALHLRPYANTQTSSLSGGNRRKLSVAVALVSQPSLIFLDEPSAGMDP 1969

  Fly  1300 ASRRHVWTIINEVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKG--MT 1362
            .|::.:|.:|..:.:.||||:||||:|:|..|||::..|:..|.|..:|..||:|:|..||  :|
 Worm  1970 GSQQFLWKVIERLCKSGKAVVLTSHSMEECEALCTRIAIMDRGRIRCLGGKQHLKSKYGKGSMLT 2034

  Fly  1363 LKLVVNVQPDNMVA-MLTKIEDDIYMTYPNAELKEKYE--FSGRLTFQISKDT-SWSEIFEYVEG 1423
            :|:..:.....:.. |.:|:.|.           .:.|  ....:...|.:.| |.:.:.|.|..
 Worm  2035 MKMGKDENAKEIAGIMRSKLGDG-----------SRVEAIHCSTIFIHIEQGTASVARVLEIVNQ 2088

  Fly  1424 NRSSWHLEDYSLSQPSLEDAFEEIAE 1449
            .:..:.::|::|:|.:|::.|:.|||
 Worm  2089 VKKMYDVDDFTLTQSTLDNVFQSIAE 2114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 rim_protein <81..1451 CDD:130324 399/1565 (25%)
abt-2NP_490949.3 rim_protein 39..2117 CDD:130324 414/1651 (25%)

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