DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42816 and ldd

DIOPT Version :10

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:XP_061515576.1 Gene:ldd / 1275311 VectorBaseID:AGAMI1_012267 Length:2030 Species:Anopheles gambiae


Alignment Length:1581 Identity:361/1581 - (22%)
Similarity:649/1581 - (41%) Gaps:344/1581 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KDLPSPPIFKSDNSSTL---QDVGIMIIVIIIFFVVVSLTKSIVEEKELQLKVTLNLMGVGSCLQ 108
            |..|.|...|.|....|   |.:.:...:.:|..|..|:.:.| ..||....:.:..||:.|..:
Mosquito   618 KQFPYPKYTKDDFKKGLYLAQAIQMAYFIALIVHVASSVRQKI-WMKESGNSMLMRSMGLKSGSE 681

  Fly   109 WVAWYIQTF----IIFLIGSSIITLFWKLVLPNSEISFMPFTHWSMALFVLLVLSHCTICFSFLM 169
            .|:|.|.||    |:||||.:|  |:...:|.:|...|: |.:  :.||.:.::..|.:|..|..
Mosquito   682 TVSWVITTFIEISIVFLIGLAI--LYGGGLLVHSNQLFL-FCY--LVLFGVCLIGFCYMCSMFFN 741

  Fly   170 SSLISTTYRISLVTFLALIATYLPFLILHSKGCSEGLNVFLSLFLLSGLQVLVVGICM------- 227
            |:.|.     |:.|.:..:.|:||::|:.:.|.:           ||.....|..:..       
Mosquito   742 SASIG-----SVSTVILFLITFLPYIIIIALGAT-----------LSSAAKFVANLSFSTAFCYA 790

  Fly   228 W------EDYGEGLQWGNLFETSWPGGTLSVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQP 286
            |      |....|..:.:.|..:.....|..| ||:|::.|.....:..||              
Mosquito   791 WRHVIRMELQHRGANFSSAFRGAIAENDLKFG-ILMVLLDAVIYFTIGYLY-------------- 840

  Fly   287 WHFPCTRCCSTESLLPYSRLFNRIFGIYSAAPDEERPDLQLIEPDPVDKIAGVQIRGLSKTF--G 349
                  :|..                       ::......::...:||..|.::|.:...:  |
Mosquito   841 ------QCFK-----------------------KDETTFHTVKRIKLDKSIGAELRNVDVAYEKG 876

  Fly   350 KMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTA-------LINGFDIRQERR 407
            ..:|:.:||......::|.|:|.|||||:|:|.:|.|.:.|..|..       .|:|.     |.
Mosquito   877 GKKVLSDVSITFRRDEVTCLLGRNGAGKSTIIKLLTGQVRPIEGDVHLPLDYDFISGI-----RN 936

  Fly   408 QAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLNLQEKKRLAARNLSG 472
            .|:: ||||||.:||..:|::..|:||::|::..||.:  :||...|:.|.:...:...|.:|||
Mosquito   937 NAEK-IGLCPQNDVLIPNLTAKEHLQLYARIKLTRGFD--TEVSRTLENLKMGPYQHYRASDLSG 998

  Fly   473 GTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGDR 537
            |.:|||.:|.:..|...::|.|||.:.:|..||:.:|.||...::...::|.||.||:.|.|.|:
Mosquito   999 GFKRRLCIAIAFLGSPNLVILDEPCSSVDTKARKYIWELIQTLRKDRAVILATHHLDEAECLSDK 1063

  Fly   538 VVIISDGQLRCIGSLPFLKKQVDASCLITCEARKRCDLEK------LTSLISRHVGTIQPFSIKG 596
            :|::.:|:.....|...|||:...:..::...:.:.|:::      |:.|:.   ||:       
Mosquito  1064 IVMLENGKAILEQSQEELKKRFTNTIYLSIFLKHQTDVDRTVMIAQLSKLLD---GTV------- 1118

  Fly   597 RDVCYKLPLSKS----KYFSSL--------------FRDLESQMNILGVRGFSLSSVSLEEIFMS 643
             |:.|.:..:.:    |..||.              ...|:||..|   ..|.:.:.:|..||.:
Mosquito  1119 -DLRYDMSATLNQLDFKITSSTNDSQVLNIEPLLEHMAQLKSQKQI---DSFEIRNENLLNIFST 1179

  Fly   644 FGAED------LNSRQSGGAEKRDDDDRDDDEENEVQDGNVRSCKKQWRAMMTKKVMALYDNKVY 702
            ..|.|      :....:|.:.....:.....:.|   |..:.:....| .:..|::.....|...
Mosquito  1180 VNASDPTPADPMLQNGNGTSATHIPNGFHGPKTN---DSKLSTMSIMW-TLFCKRMRHFMRNYRL 1240

  Fly   703 FLLLLLTPIVYYITTL-MMATKP--HHSGRPTFNISDYGVDKFTILLSVPVS-KSYTEERRADSI 763
            .:.||:.|.::.|..: .|..:|  .|.....|:.:.|           |.| :.||.....|..
Mosquito  1241 LVCLLVLPTIFEIIAMGFMTIRPPGEHDLMVNFSTALY-----------PRSAEFYTNATDGDEY 1294

  Fly   764 ASLIKGKLKLIVVSEQ-------------IKDYVDDKWKSREGRREINFVSMAIDTGDRTGLIGW 815
            ...|...:......|.             :....||..:.|.|...||          :...|.|
Mosquito  1295 RDAIVSDVLAHCTDEYCSIFNSSYEAYRWVLSTTDDYTERRYGGITIN----------KEKNIVW 1349

  Fly   816 VGPRHYVHAAPMILNLVYNA-LAQELIGPKISIEVTSVPFTLRKKE---DFLISNNGDIPIYVIG 876
            ...:.| |:.|..||::..| |..||.....:|...:.|..:.:.|   ..::....|..|.:|.
Mosquito  1350 YNNKGY-HSMPTWLNMLDTAVLRAELNDSSYTIRTINHPLKIEEDELSVSSMLQQIADAGISLII 1413

  Fly   877 YVSIAMIIFSSAV--IQERVSHMKMLQEVSGLEMITYWLSHLAFDMVVFFI-LVLALLLPLYGYA 938
            .::.::::..::|  :.||:...|:.|.::|:.:.|||.....:|.::|.| |.||:::......
Mosquito  1414 LLAFSLVVAGASVYIVNERIRGEKLQQRLAGVNVFTYWSVTYIWDAMIFLIALALAVIVFKVFAI 1478

  Fly   939 PWYLL------LCVLF-FTGLAGLIFIYFLISMLS-ATFLAVSMILLSVI--IGSLILMILGAL- 992
            |.|:.      :|:|. |.|.|.:..::....:.: |:|..:|:..|:||  :|:|.::||..: 
Mosquito  1479 PAYVAREQLEGICLLLVFYGFATIPAVHLFEKLFTDASFANMSIFCLNVITALGTLTIIILFDIL 1543

  Fly   993 ------ALIFKMVYVAIYVANMHPLIAGYNCIQKCFHYMS---LCGSYISEAQNPLSENLTSDEM 1048
                  ..|...:..|..|...|.|..|  .|:...:|::   ....||...::|:...|     
Mosquito  1544 GDTDESERIRNALNRAFLVLPQHALSDG--LIELSKNYITAEIFKRYYIDSYKSPVYSTL----- 1601

  Fly  1049 YCINPLAFLEPRCVCVNPMTWPDMLVMLGTAIILFLLIMFFEYGSCVWYRCKGCCPYSSKGSIED 1113
                    |.|..:.         |.::|...:|..:.:.::....::.|..|    :|:..:.|
Mosquito  1602 --------LHPHLIA---------LAVMGFIFMLLNIAIEYKVVQRIYNRIVG----TSQPKVHD 1645

  Fly  1114 ----------PKVSREAEKIRAMDADQIGTRALVVNGVSKKY-GC--------DQLAVNNISFAL 1159
                      ..:||...|.:::.||||    |.|:.:.|:| ||        ....|.::||.|
Mosquito  1646 INGMDTPDYSTVISRVEGKKKSITADQI----LSVDNLRKRYRGCGGGGGGAKGLEVVKDVSFKL 1706

  Fly  1160 KPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFFEFL 1224
            :...|.||||.|||||:|.|.::.||       :..||.|.........   .||||::.....|
Mosquito  1707 RYGECFGLLGTNGAGKSTIFAILSGE-------LLPSGGSFTFYSTHGP---SYCPQNNFLDPLL 1761

  Fly  1225 TGRQLLKVFLLIWGFPSKDLNKRCEKLADQF---GFRKHLDKKITYYSGGTKRKINAAVAC-GAN 1285
            |..:::..:..:....|  ::|...:...::   .:||.|.|.:   |||.:||:..||:| |.:
Mosquito  1762 TVEEVIVFYGKLRNIES--IDKLIMETLKEYHLEAYRKVLVKNL---SGGNRRKLCVAVSCFGQS 1821

  Fly  1286 SLICLDEPSAGVDPASRRHVWTIINEVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSV 1350
            .:|.:|||::.:||.:|..|::.|..:..|.:::|||||::.||:.:|.:..||.||.:..:.:.
Mosquito  1822 EIILMDEPTSDLDPVTRSIVYSTIERLNAQNRSILLTSHSISEIDRICQRIAILKDGELLTVDTP 1886

  Fly  1351 QHVKNKIAKGMTLKLVV----------------NVQPD-----NMVAMLTKIEDDIYMTYPNA-- 1392
            ..:|.:......:.|.:                ||..|     |.|..:.:|       ||..  
Mosquito  1887 DRLKERFGHSYQITLYLEGLREVDFLRVIKREFNVTRDIILHKNSVQFVCQI-------YPEGGS 1944

  Fly  1393 --ELKEKYEFSGRLTFQISKDT---------------SWSEIF----EYVEGNRSSWHLEDYSLS 1436
              |...|...:|.:|..:. ||               :.||:|    .:.:.|:..     |::|
Mosquito  1945 QREENGKPHKNGHVTIMLD-DTGSLVVAPGTSTSATGTASELFLKLQRFAQANKLR-----YTIS 2003

  Fly  1437 QPSLEDAFEEIAEERRKKKSN 1457
            :..::..||.:.:...:..:|
Mosquito  2004 RCQMDQVFENVLQNHEEDHAN 2024

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 rim_protein <81..1451 CDD:130324 351/1536 (23%)
lddXP_061515576.1 None

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