Sequence 1: | NP_730301.3 | Gene: | CG42816 / 39977 | FlyBaseID: | FBgn0261998 | Length: | 1459 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006537617.1 | Gene: | Abca1 / 11303 | MGIID: | 99607 | Length: | 2263 | Species: | Mus musculus |
Alignment Length: | 1737 | Identity: | 453/1737 - (26%) |
---|---|---|---|
Similarity: | 777/1737 - (44%) | Gaps: | 401/1737 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 GFLAVQQALSQVHIKHKCKEFNKTQGDIKFPPIKDLPSP----PIFKSDNSSTLQDVGIMIIVII 74
Fly 75 IFFVVVSLTKSIVEEKELQLKVTLNLMGVGSCLQWVAWYIQTFIIFLIGSSIITLFWKLVLPNSE 139
Fly 140 ISFMPFTHWSMALFVLLVLSHCTICFSFLMSSLISTTYRISLVTFLALIATYLPFLILHSKGCSE 204
Fly 205 GLNVFLSLFLLS------GLQVLVVGICMWEDYGEGLQWGNLFETSWPGGTLSVGYILLVMILAS 263
Fly 264 FLSLLLCLYLEKIRPGPYGVPQPWHFPCTRC-CSTESLLPYSRLFNRIFGIYSAAPDEERPDLQL 327
Fly 328 IEPDPVDKIAGVQIRGLSKTF--GKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISP 390
Fly 391 TSGTALINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLK 455
Fly 456 KLNLQEKK-RLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEGC 519
Fly 520 TILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQV---------------------DASC 563
Fly 564 LITC-------------------EARKRC----DLEKLTSLISRHVGTIQPFSIKGRDVCYKLPL 605
Fly 606 SKSK--YFSSLFRDLESQMNILGVRGFSLSSVSLEEIFMSFGAED-LNSRQSGG----------- 656
Fly 657 AEKR------------DDDDRDDDEENEV------QDGNVRSCKKQWR-------AMMTKKVMAL 696
Fly 697 YDNKVYFLLLLLTPIVYYITTLMMA---------------------------------------- 721
Fly 722 ---TK------------------------------------------------------------ 723
Fly 724 --------PHHSGRPT----------------FNISDYGVDKFTILLSVPV-SKSYTEERR---- 759
Fly 760 ------------ADSIASLIKGKLKLIVVSEQIKDYVDDKWKSREGRREINFVSMAIDTGDRTGL 812
Fly 813 IGWVGPRHYVHAAPMILNLVYNAL----AQELIGP-KISIEVTSVPFTLRKK---EDFLISNNGD 869
Fly 870 I-----PIYVIGYVSIAMIIFSSAVIQERVSHMKMLQEVSGLEMITYWLSHLAFDM--------- 920
Fly 921 -VVFFIL-------------VLALLLPLYGYAPWYLLLCVLFFTGLAGLIF-IYFLISMLSATFL 970
Fly 971 AVSMILLSV-IIGSLILMI--------LGALALIFKMVYVAIYVANMHPLIAGYNCIQKCFHYMS 1026
Fly 1027 LCGSYISEAQNPLSENLTSDEMYCINPLAFLEPRCVCVNPMTWP----DMLVMLGTAIILFLLIM 1087
Fly 1088 FFEYGSCVWYRCKGCCPYSSK---GSIEDPKVSREAEKIRAMDADQIGTR-ALVVNGVSKKYGCD 1148
Fly 1149 QL-AVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELG 1212
Fly 1213 YCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKIN 1277
Fly 1278 AAVA-CGANSLICLDEPSAGVDPASRRHVWTIINEVAQQGKAVLLTSHNMDEINALCSKSVILVD 1341
Fly 1342 GSIYAMGSVQHVKNKIAKGMTLKL-VVNVQPDNMVAMLTKIEDDIYMTYPNAELKEKYEFSGRLT 1405
Fly 1406 FQI-SKDTSWSEIFEYVEGNRSSWHLEDYSLSQPSLEDAFEEIAEER 1451 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42816 | NP_730301.3 | CcmA | 336..643 | CDD:224054 | 129/355 (36%) |
ABC_subfamily_A | 339..556 | CDD:213230 | 101/219 (46%) | ||
ABC2_membrane_3 | <821..1018 | CDD:289468 | 59/242 (24%) | ||
CcmA | 1135..1450 | CDD:224054 | 113/318 (36%) | ||
ABC_subfamily_A | 1136..1354 | CDD:213230 | 85/219 (39%) | ||
Abca1 | XP_006537617.1 | rim_protein | 6..2238 | CDD:130324 | 453/1737 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 159 | 1.000 | Domainoid score | I4067 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.730 |