DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42816 and abca5

DIOPT Version :9

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:XP_005156458.1 Gene:abca5 / 100151075 ZFINID:ZDB-GENE-050517-5 Length:1673 Species:Danio rerio


Alignment Length:1603 Identity:394/1603 - (24%)
Similarity:725/1603 - (45%) Gaps:313/1603 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TGFLAVQQALSQVHIKHKCKE--FNKTQ---------GDI---KFPPIKDLPSPPIFKSDNSSTL 63
            :||:.:|..:....|:.|.|.  :|:.:         |.:   |||                   
Zfish   191 SGFIRLQSVIDAAIIQMKTKRPVWNELKVRAVMMGHPGSVEVQKFP------------------- 236

  Fly    64 QDVGIMIIVIIIFFVVVS-LTKSIVEEKELQLKVTLNLMGVGSCLQWVAWYIQTFIIFLIGSSII 127
             ...|.|.:::.|...|| |..::..|||.:||.|:.:||:.....|::|       .|:.::::
Zfish   237 -HALISIYLVLAFTPFVSFLIVNVAAEKEQRLKDTMGMMGLYDSAFWLSW-------GLLYAALV 293

  Fly   128 TLFWKLVLPNSEISFMPFTHWSMALFVLLVLSHCTICFS---FLMSSLISTTYRISLVTFLALI- 188
            |                    :|:: ::.|::.||..||   |.:..|:...|.||.:.|..:: 
Zfish   294 T--------------------TMSI-LMAVIATCTPLFSNSNFFVIFLLIFLYGISSIFFSFMLT 337

  Fly   189 --------ATYLPFLILHSKGCSEGLNVF--------------LSLFLLSGLQVLVVGICMWEDY 231
                    |:.:..::....||   |::|              |.|...|...:.:..:...|..
Zfish   338 PLFKKPKFASTVGSMLTVVFGC---LSLFTVLMRDFPQSAVWLLCLLSPSAFSIGIAQVVYLEAQ 399

  Fly   232 GEGLQWGNLFETSWPGGTLSVGYILLVMI-LASFLSLLLCLYLEKIRPGPYGV---------PQP 286
            |:|..:.:|      |......|:.|||: |...|.|||.:||:::.||.:|.         |..
Zfish   400 GDGAVFSSL------GNGPHALYVPLVMLFLDCILYLLLAIYLDQVLPGEFGTKRSVLYFLKPSY 458

  Fly   287 WHFPCTRCCSTESLLPYSRLFNRIFGIYSAAPDEERPDLQLIEPDPVDKIAGVQIRGLSKTF--- 348
            |.....|.....|:  |....|.     :.|.||   .::.:.|:...|.. ::|..:.|.:   
Zfish   459 WSKRRKRYVEVSSV--YEGEVNG-----TPAIDE---SVEAVSPEFRGKEV-IRICNIRKIYREK 512

  Fly   349 -GKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGFDIRQ--ERRQAQ 410
             .|:|.::.::||::|||||.|:||:||||:||:::|.|...||.|||.|.|..:.:  |..:.:
Zfish   513 DTKVEALRGLTFDIYEGQITALLGHSGAGKSTLMNILCGICPPTEGTATIYGSPVAEIAEGAEMK 577

  Fly   411 RCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLNLQEKKRLAARNLSGGTQ 475
            :.:|:|||.|::|..|:...|:::|:.::|:..:::..||:..||.|:|::.....|:|||||.:
Zfish   578 QLVGICPQFNIIFDVLTVEEHLRIFAAIKGILPSDIDGEVRKVLKDLDLEKIMDALAKNLSGGQK 642

  Fly   476 RRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVI 540
            |:|||..::.|..|:|:.|||:.|:||.:|.::|.|:...:.|...:|:||.:|:.::|.||..:
Zfish   643 RKLSVGIAILGDPKILLLDEPTAGMDPVSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKAV 707

  Fly   541 ISDGQLRCIGSLPFLKKQVDASCLITCEARKRCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPL 605
            ||.|||:|:||..:||.:......:.....:.|::|.:|||:.:||...|....:..::.:.||.
Zfish   708 ISQGQLKCVGSSLYLKTKCGVGYHLRMSVTEGCEVEGITSLVKQHVPKAQLSRQQEAELTFTLPF 772

  Fly   606 SKSKYFSSLFRDLESQMNILGVRGFSLSSVSLEEIFMSFGAE------------DLNSRQSGGAE 658
            .....|..||.:|:.:.: ||:..:.:|..:||::|:...||            .....:.|.|.
Zfish   773 ESMDTFPGLFAELDCRPD-LGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFNQEKVEEEGDAS 836

  Fly   659 KRDDDDRD----DDEENEVQDGNVRSCKKQWRAMMTKKVMALYDNKVYFLLLL-----LTPIVYY 714
            ..||.|:.    .|...:...|:.     .||...         :.|.:|.:|     ..||:|.
Zfish   837 SMDDTDQRLLTFSDSRQDTVTGHA-----LWRQQF---------STVAWLHMLNLQRERKPIIYN 887

  Fly   715 IT----------TLMMAT------KPHHSGRPTFNI-SDYGVDKFTILLSVPVSKSYTEERRADS 762
            :|          .|.:||      .|.....|.:.: .:....|:|..|.|   ::.|:...:..
Zfish   888 LTLFVVFLSAMLILSVATGNIQIHSPERLFSPIYLLRRNEAPHKYTTSLLV---QNSTDSDLSGF 949

  Fly   763 IASLIKGKLKLIVVSEQIK--DYVDDKWKSREGRREINFVSMAID-TG---DRTGLIGWVGPRHY 821
            |.:|....:|:    |.:|  ||:           ....||.||: ||   |.|.::.:....  
Zfish   950 IHNLQSQDIKV----EMMKKLDYM-----------SAAPVSAAINVTGPSKDFTYILAFNSTT-- 997

  Fly   822 VHAAPMILNLVYNALAQELIGPKISIEVTSVPFTLRKKEDFLISNNGDIPIYVIGYVSIAMI--- 883
            ||:.||.:|::.|||.:...|.. .|...|.||      |:.|.:.....:..|..|.:.|:   
Zfish   998 VHSLPMAVNVLSNALLRGYNGTG-HIRTWSKPF------DYQIPDKTSYALVYIEAVILGMLAAG 1055

  Fly   884 ---IFSSAVIQERVSHMKMLQEVSGLEMITYWLSHLAFDMVVFFILVLALLLPLYGYAPWYLL-- 943
               .|:....::|....:....:|||....||....|.|:..:::::..:...|:.:....||  
Zfish  1056 MPAYFAMDHTRDRELKCRSTLRISGLVPSAYWCGQAAIDVPFYYLILTCMTSTLFAFHSTNLLTS 1120

  Fly   944 -------LCVLFFTGLAGLIFIY-----FLISMLSATFLAVSMILLSVIIGSLI-LMILGALALI 995
                   ||::.|:. |.::|.|     |:....:..|.:|..:::.|:..|:: |.::...|.:
Zfish  1121 HNILSVALCLIGFSP-AMVLFTYCVSFMFVRVQSNRDFFSVVSMMVCVVSASIVQLALVNESASM 1184

  Fly   996 FKMVYVAI-YVANMHPLIAGYNCIQKCFHYMSLCGSYISEAQNPLSENLTSDEMYCINPLAFLEP 1059
            .::::.|: :.:.::||:...|||           :..:..|:|..::.....::    ::.:.|
Zfish  1185 ARLLHNALCFFSPLYPLMGCLNCI-----------TVATFVQSPHDDDFLWKNLF----ISVVAP 1234

  Fly  1060 RCVCVNPMTWPDMLVMLGTAIILFLLIMFFE--YGSCVWYRCKGCCPYSSKGSIEDPKVSREAEK 1122
            ...|                |:|.:.:.:.|  ||... .:....|..||:..   .|..|..|:
Zfish  1235 YIQC----------------ILLLVSLRWLEIRYGGKT-MKNDQLCRISSQAK---SKAQRNPEE 1279

  Fly  1123 IRAMDADQIGTRA----------------LVVNGVSKKY-----GCD-----QLAVNNISFALKP 1161
            ..:.|.|....:|                :||:.:.|:|     |..     ::|..||||.::.
Zfish  1280 NMSEDEDVQMEKARVKEAMTCQCCEEKPVVVVSNLRKQYKGKREGFSLNKKRKVATKNISFCVRK 1344

  Fly  1162 SHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISGYSMRMK-RNKAMKELGYCPQSDSFFEFLT 1225
            ...:||||||||||:|...|:.|:.....|.|.:..|....: ....::.:|||||.:..:..:|
Zfish  1345 GEVLGLLGPNGAGKSTIMHMLSGDTEATAGQILMGDYGTDFQPAENPLEHVGYCPQVNPLWPRIT 1409

  Fly  1226 GRQLLKVFLLIWGFPSKDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVA-CGANSLIC 1289
            .::.|:::..|.|...:|:....:::......:.||.|:....|.|.|||:..|:: .|...::.
Zfish  1410 LQEHLEIYSAIKGLRQRDIPNIIKRVVSALELKDHLYKQSKNLSAGLKRKLCFALSMLGNPQIVL 1474

  Fly  1290 LDEPSAGVDPASRRHVWTIINEV-AQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHV 1353
            |||||.|:||.|::.:|..|... ..:.:..|||:|.|:|..|:|.:..|:|.|.:..:||:||:
Zfish  1475 LDEPSTGMDPKSKQRMWRAIRAAFKNKQRGALLTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHL 1539

  Fly  1354 KNKIAKGMTLKLVVNVQPD----NMVAMLTKIEDDIYMTYPNAELKEKYEFSGRLTFQISKD--T 1412
            |.|..:|.:|:  :|::.:    ..||:|.|   :|...:|:|..::  .|:..:.::|..:  .
Zfish  1540 KGKFGRGYSLE--INLREELTGLQQVALLHK---EILKIFPHAVRQD--SFATMMVYKIPMEDVK 1597

  Fly  1413 SWSEIFEYVEGNRSSWHLEDYSLSQPSLEDAFEEIAEERRKKK 1455
            |.::.|..:|..:.:::.|:|:.||.:||..|.|.|:|:..::
Zfish  1598 SLAKSFAQLESAKQNFNFEEYNFSQSTLEQVFMEFAKEQENEE 1640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 CcmA 336..643 CDD:224054 106/312 (34%)
ABC_subfamily_A 339..556 CDD:213230 84/222 (38%)
ABC2_membrane_3 <821..1018 CDD:289468 47/218 (22%)
CcmA 1135..1450 CDD:224054 99/349 (28%)
ABC_subfamily_A 1136..1354 CDD:213230 72/230 (31%)
abca5XP_005156458.1 ABC2_membrane_3 <165..395 CDD:289468 49/254 (19%)
CcmA 498..810 CDD:224054 106/313 (34%)
ABC_subfamily_A 500..723 CDD:213230 84/222 (38%)
ABC2_membrane_3 889..>1148 CDD:289468 62/286 (22%)
CcmA 1307..1634 CDD:224054 97/333 (29%)
ABC_subfamily_A 1309..1540 CDD:213230 72/230 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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