Sequence 1: | NP_730301.3 | Gene: | CG42816 / 39977 | FlyBaseID: | FBgn0261998 | Length: | 1459 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005173137.1 | Gene: | abca1b / 100136868 | ZFINID: | ZDB-GENE-030131-9826 | Length: | 2282 | Species: | Danio rerio |
Alignment Length: | 1717 | Identity: | 456/1717 - (26%) |
---|---|---|---|
Similarity: | 757/1717 - (44%) | Gaps: | 389/1717 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 IKDLPSP----PIFKSDNSSTLQDVGIMIIVIIIFFVVVSLTKSIVEEKELQLKVTLNLMGVGSC 106
Fly 107 LQWVAWYIQTFIIFLIGSSIITLFWKL--VLPNSE--ISFMPFTHWSMALFVLLVLSHCTICFSF 167
Fly 168 LMSSLISTTYRISLVTFLALIATYLPFLILHSKGCSEGLNVFLSLFLLSGLQVLVVG-----ICM 227
Fly 228 WEDYGEGLQWGNLFETSWPGGTLSVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQPWHFPCT 292
Fly 293 RCC-----STESLLPYSRLFNRIFGIYSAAPDEERPDLQLIEPDPVDKIAGVQIRGLSKTF--GK 350
Fly 351 MEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGFDIRQERRQAQRCIGL 415
Fly 416 CPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLNLQEKKRLAARNLSGGTQRRLSV 480
Fly 481 ACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVIISDGQ 545
Fly 546 LRCIGSLPFLKKQVDASCLITCEAR------KRC------------------------------- 573
Fly 574 ------------------DLEKLTSLISRHVGTIQPFSIKGRDVCYKLPLSKSK--YFSSLFRDL 618
Fly 619 ESQMNILGVRGFSLSSVSLEEIFMSFGAED----------------LNSRQSGGAEKR------- 660
Fly 661 DDDDRD------DDEENEV-----QDGNVRSCKKQWR-------AMMTKKVMALYDNKVYFLLLL 707
Fly 708 LTPIVYYITTLM-------------MATKP--------------------HHSGRPTFNISDYGV 739
Fly 740 -----------------DKFTI------LLSVPVSKSYTEERRADSIASLIKGKLKL-------- 773
Fly 774 -------IVVSE----------QIKDYVDDKW-----KSREGRREIN------------------ 798
Fly 799 --------------FVSMAIDTG---DR---------TGL------------IGWVGPRHYVHAA 825
Fly 826 PMILNLVYNALAQELIGP-----KISIEVTSVPFTLRKKE-----------DFLISNNGDIPIYV 874
Fly 875 IGYVSIAMIIFSSAVIQERVSHMKMLQEVSGLEMITYWLSHLAFDMVVFFILVLALLLPLYGYAP 939
Fly 940 WYLLLCVLFFTGLAGLIFIYF-LISMLSATFLAVSMILLSVIIGSLILMILGALALIFKMVYVAI 1003
Fly 1004 YVANMHPLIAGYNCIQKCFHYMSLCGSYISEAQNPLSEN-LTSDEMYCI----------NPLA-- 1055
Fly 1056 ---FLEPRCVCVNPMTW----PDMLVMLGTAIILFLLIMFFEYGSCVWYRCKGCCPYSSKGSIED 1113
Fly 1114 PKVSREAEKIR--AMDADQIGTRALVVNGVSKKYGCDQL-AVNNISFALKPSHCVGLLGPNGAGK 1175
Fly 1176 TTTFKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFP 1240
Fly 1241 SKDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVA-CGANSLICLDEPSAGVDPASRRH 1304
Fly 1305 VWTIINEVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKGMTLKL-VVN 1368
Fly 1369 VQPDNMVAMLTKIEDDIYMTYPNAELKEKYEFSGRLTFQI-SKDTSWSEIFEYVEGNRSSWHLED 1432
Fly 1433 YSLSQPSLEDAFEEIAEERRKKKSNQS 1459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42816 | NP_730301.3 | CcmA | 336..643 | CDD:224054 | 135/365 (37%) |
ABC_subfamily_A | 339..556 | CDD:213230 | 106/218 (49%) | ||
ABC2_membrane_3 | <821..1018 | CDD:289468 | 50/213 (23%) | ||
CcmA | 1135..1450 | CDD:224054 | 118/318 (37%) | ||
ABC_subfamily_A | 1136..1354 | CDD:213230 | 86/219 (39%) | ||
abca1b | XP_005173137.1 | rim_protein | 1..2242 | CDD:130324 | 453/1705 (27%) |
ABC_subfamily_A | 902..1121 | CDD:213230 | 106/218 (49%) | ||
ABC_subfamily_A | 1932..2152 | CDD:213230 | 87/224 (39%) | ||
DUF4162 | 2146..2238 | CDD:290451 | 35/98 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.730 |