DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-A and Ampd2

DIOPT Version :9

Sequence 1:NP_524130.1 Gene:Adgf-A / 39976 FlyBaseID:FBgn0036752 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_006233230.3 Gene:Ampd2 / 362015 RGDID:2110 Length:900 Species:Rattus norvegicus


Alignment Length:508 Identity:96/508 - (18%)
Similarity:162/508 - (31%) Gaps:179/508 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 IMKAKLKEFDEGLVTPH-----LFKPSQHIFDVLDGIRNTDLFKLLKKMPK---GAVLH---AHD 152
            ::..::||.......||     :.|...|| .....:....|.:.:|:..|   ..::|   ..:
  Rat   412 VLLNEMKELAAQKKVPHRDFYNIRKVDTHI-HASSCMNQKHLLRFIKRAMKRHLEEIVHVEQGRE 475

  Fly   153 TALCSTAAIINLTYYEHLWSCQQDGDLSASAL----------RFSK--DKPQALSDCDWSLLSD- 204
            ..|......:|||.|          |||...|          ||.|  .|...:.:   |:|.: 
  Rat   476 QTLREVFESMNLTAY----------DLSVDTLDVHADRNTFHRFDKFNAKYNPIGE---SVLREI 527

  Fly   205 -------VRAKYGADKVDDYLAE-----------RLTLYPTKKFE-DNNAAWSTFMSIFNLLDGL 250
                   :..||.|..:.:.:::           ||::|...:.| |..|.|:....:       
  Rat   528 FIKTDNKISGKYFAHIIKEVMSDLEESKYQNAELRLSIYGRSRDEWDKLARWAVNHRV------- 585

  Fly   251 VMYAPVWADYYYKALEEFYEDGVLYLEFRSVVPTLYDMDGTE-------------FTPMDTVRIY 302
                              :...|.:|   ..||.|:|:..|:             |.|:....::
  Rat   586 ------------------HSPNVRWL---VQVPRLFDVYRTKGQLANFQEMLENIFLPLFEATVH 629

  Fly   303 VETLEKFKEAHPDFIGSRMIYAPIRYTNAEGVTGYIQTLKQIKEKYPEFVAGFDLVGQE------ 361
                   ..:||:.                             ..:.|.|.|||.|..|      
  Rat   630 -------PASHPEL-----------------------------HLFLEHVDGFDSVDDESKPENH 658

  Fly   362 --EMGRPLRDFVDELLSIPDDIDFYF------------------------HAGETNWFGSTVDEN 400
              .:..||.:...|..:.|.....|:                        |.||....     .:
  Rat   659 VFNLESPLPEAWVEEDNPPYAYYLYYTFANMAMLNHLRRQRGFHTFVLRPHCGEAGPI-----HH 718

  Fly   401 LIDAILLGTKRIGHGFGLVKHPVVLDMLKKLNVAIEVNPISNQVLQLVSDFRNHPCSHFFADGYP 465
            |:.|.:| .:.|.||..|.|.||:..:.....:.|.::|:||..|.|  .:..:|...:.:.|..
  Rat   719 LVSAFML-AENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFL--SYHRNPLPEYLSRGLM 780

  Fly   466 VVISSDDPSFWKAT--PLTHDFYIAFLGIASQHSDLRLLKKLALNSIQYSSLT 516
            |.:|:|||..:..|  ||..::.||.........|   :.:||.||:..|..:
  Rat   781 VSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCD---MCELARNSVLMSGFS 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-ANP_524130.1 A_deaminase_N 54..139 CDD:285627 8/44 (18%)
adm_rel 66..538 CDD:273620 96/508 (19%)
ADGF 119..531 CDD:238646 91/483 (19%)
Ampd2XP_006233230.3 AMPD 377..873 CDD:238644 96/508 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.