DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-A and ampd3b

DIOPT Version :9

Sequence 1:NP_524130.1 Gene:Adgf-A / 39976 FlyBaseID:FBgn0036752 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_956142.1 Gene:ampd3b / 333997 ZFINID:ZDB-GENE-030131-5929 Length:779 Species:Danio rerio


Alignment Length:606 Identity:131/606 - (21%)
Similarity:211/606 - (34%) Gaps:202/606 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LCVCLSFGPGPVESRTRPKN-----QVDRKLLTIYG-----------STP------------HVE 53
            :|...|.|..|......|:|     ::...::.:|.           |.|            ||.
Zfish   210 ICPSPSEGEDPYSMEDLPQNLNYSLKMKDGIIYVYDNEDALKQDLPRSLPYPDLETFAIDLSHVL 274

  Fly    54 ALLGPGRPTPDTYKTLRSAFFRYEESRSLGHDLDLNSREIKANETIMKAKLKEFDEGLVTPHLFK 118
            |::..| || .||...|..|.   .|:...|::        .||   .|:|||..   ..||   
Zfish   275 AMIADG-PT-KTYCHRRLNFL---TSKFQLHEM--------LNE---MAELKELK---CVPH--- 317

  Fly   119 PSQHIFDVLDGIRNTDLFKLLKKMPKGAVLHAHDTALCSTAAIINLTYYEHLWSCQQDGDLSASA 183
              :..::|    |..|             .|.|      .||.:|   .:||             
Zfish   318 --RDFYNV----RKVD-------------THIH------AAACMN---QKHL------------- 341

  Fly   184 LRFSKDKPQALSDCDWSLLSDVRAKYGADKVDDYLAERLTLYP---TKKFEDNNAAWSTF--MSI 243
            |:|.:|..|  ::.|..:|.....|:...:|    .|.|.:.|   |....|.:|...||  ...
Zfish   342 LKFIQDSYQ--TEADRVVLEKGGKKFTLKQV----FENLKMDPYDLTVDSLDVHAGRQTFHRFDK 400

  Fly   244 FNLLDGLVMYAPVWADYYYKALEEFY--EDGVLYLEF--RSVVPTLYDMDGTEFTPMD-TVRIYV 303
            ||     ..|.||.|:    .|.|.|  .|..:..|:  |.:....:|::.:::...: .:.||.
Zfish   401 FN-----SKYNPVGAN----ELREIYLKTDNYINGEYFARLIKEVAHDLEESKYQHAEPRLSIYG 456

  Fly   304 ETLEKFKEAHPDFIGSR--------MIYAPIRY---TNAEGVTGYIQTLKQI----------KEK 347
            ...|:::.....||..:        ||..|..|   .:.:.:..:.:.|:.|          .:|
Zfish   457 RAPEEWESLSKWFIMQKLHSPNMRWMIQVPRIYDIFRSKKIIANFAKMLENIFLPLFQATVNPQK 521

  Fly   348 YPEF------VAGFDLVGQE--------------------EMGRPLRDFVDEL---LSIPDDI-- 381
            :.|.      |.||:.|..|                    |...|...::..:   :.:.:::  
Zfish   522 HKEMHVFLKHVTGFNSVDDESKHSDHIFNYKSPKPEEWTSEENPPYTYYLFHMYANIMVLNNLRK 586

  Fly   382 -----DFYF--HAGETNWFGSTVDENLIDAILLGTKRIGHGFGLVKHPVVLDMLKKLNVAIEVNP 439
                 .|.|  |.||.   ||..  :|:.|.|. ...|.||..|.|.||:..:.....|.|.::|
Zfish   587 ERGLNTFLFRPHCGEA---GSIT--HLVSAFLT-ADNISHGLNLKKSPVLQYLYYLAQVPIAMSP 645

  Fly   440 ISNQVLQLVSDFRNHPCSHFFADGYPVVISSDDPSFWKAT--PLTHDFYIAFLGIASQHSDLRLL 502
            :||..|.|  ::..:|...|...|..|.:|:|||..:..|  .|..::.||          .:|.
Zfish   646 LSNNSLFL--EYSKNPLREFLQKGLCVSLSTDDPLQFHYTKEALMEEYAIA----------AQLW 698

  Fly   503 K-------KLALNSIQYSSLT 516
            |       ::|.||:..|.|:
Zfish   699 KLSTCDTCEIARNSVLQSGLS 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-ANP_524130.1 A_deaminase_N 54..139 CDD:285627 21/84 (25%)
adm_rel 66..538 CDD:273620 115/529 (22%)
ADGF 119..531 CDD:238646 102/476 (21%)
ampd3bNP_956142.1 PLN03055 157..765 CDD:178613 131/606 (22%)
metallo-dependent_hydrolases 157..765 CDD:294200 131/606 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.