DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-A and AMPdeam

DIOPT Version :9

Sequence 1:NP_524130.1 Gene:Adgf-A / 39976 FlyBaseID:FBgn0036752 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001285233.1 Gene:AMPdeam / 32352 FlyBaseID:FBgn0052626 Length:798 Species:Drosophila melanogaster


Alignment Length:515 Identity:106/515 - (20%)
Similarity:177/515 - (34%) Gaps:150/515 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LRSAFFR---YEESRSLGHDLDLNSREIKANETIMKAKLKEFDEGLVTPH-----LFKPSQHIFD 125
            |:|..:|   |..|:...|.|....||:.|.:.:              ||     ..|...|| .
  Fly   300 LKSFCYRRLCYLSSKYQMHVLLNELRELAAQKAV--------------PHRDFYNTRKVDTHI-H 349

  Fly   126 VLDGIRNTDLFKLLKKMPKG------AVLHAHDTALCSTAAIINLTYYEHLWSCQQDGDLSASAL 184
            ....:....|.:.:||..|.      .|.:.....|......:|||.|          ||:...|
  Fly   350 AASCMNQKHLLRFIKKTLKNNANEVVTVTNGQQMTLAQVFQSMNLTTY----------DLTVDML 404

  Fly   185 ----------RFSKDKPQALSDCDWSLLSDVRAKYGADKVDDYLAERLTLYPTKKFEDNNAAWST 239
                      ||.|      .:..::.:.:.|.:....|.|:||..:......|:.         
  Fly   405 DVHADRNTFHRFDK------FNSKYNPIGESRLREVFLKTDNYLNGKYFAQIIKEV--------- 454

  Fly   240 FMSIFNLLDGLVMYAPVWADYYYKALEEFYE------DGVLY---LEFRSVVPTLYDMDGTEFTP 295
               .|:|.:.....|.:....|.|:.:|:|:      |..:|   :.:...:|.|:|:    |..
  Fly   455 ---AFDLEESKYQNAELRLSIYGKSPDEWYKLAKWAIDNDVYSSNIRWLIQIPRLFDI----FKS 512

  Fly   296 MDTVRIYVETLEKFKEAHPDFIGSRMIYAPIRYTNAEGVTGYIQTLKQIKEKYPE------FVAG 354
            ...::.:.|.|..             |:.|:....|.            ..|:||      :|.|
  Fly   513 NKMMKSFQEILNN-------------IFLPLFEATAR------------PSKHPELHRFLQYVIG 552

  Fly   355 FDLVGQEEMGRPLRDFVDELLSIPDD-----------IDFYFHAGET--NWFGSTVDEN------ 400
            ||.|..|  .:|.....|..:..|::           ..:|.:|..|  |.|..:.:.|      
  Fly   553 FDSVDDE--SKPENPLFDNDVPRPEEWTYEENPPYAYYIYYMYANMTVLNKFRQSRNMNTFVLRP 615

  Fly   401 ----------LIDAILLGTKRIGHGFGLVKHPVVLDMLKKLNVAIEVNPISNQVLQLVSDFRNHP 455
                      |:...|: .:.|.||..|.|.||:..:.....:.|.::|:||..|.|  ::..:|
  Fly   616 HCGEAGPVQHLVCGFLM-AENISHGLLLRKVPVLQYLYYLTQIGIAMSPLSNNSLFL--NYHRNP 677

  Fly   456 CSHFFADGYPVVISSDDPSFWKAT--PLTHDFYIAFLGIASQHSDLRLLKKLALNSIQYS 513
            ...:.|.|..:.:|:|||..:..|  ||..::.||.........|   :.:||.||:..|
  Fly   678 LPEYLARGLIISLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCD---MCELARNSVMMS 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-ANP_524130.1 A_deaminase_N 54..139 CDD:285627 16/77 (21%)
adm_rel 66..538 CDD:273620 106/515 (21%)
ADGF 119..531 CDD:238646 93/457 (20%)
AMPdeamNP_001285233.1 PLN03055 248..784 CDD:178613 106/515 (21%)
AMPD 284..780 CDD:238644 106/515 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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