DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-A and Ampd3

DIOPT Version :9

Sequence 1:NP_524130.1 Gene:Adgf-A / 39976 FlyBaseID:FBgn0036752 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_113732.2 Gene:Ampd3 / 25095 RGDID:2111 Length:801 Species:Rattus norvegicus


Alignment Length:558 Identity:114/558 - (20%)
Similarity:187/558 - (33%) Gaps:202/558 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 HVEALLGPGRPTPDTYKTLRSAFFRYEESRSLGHDLDLNSREIKANETIMKAKLKEFDEGLVTPH 115
            |:.||:..| || .||...|..|.   ||:...|:: ||             ::.||.|....||
  Rat   294 HILALITDG-PT-KTYCHRRLNFL---ESKFSLHEM-LN-------------EMSEFKELKSNPH 339

  Fly   116 LFKPSQHIFDVLDGIRNTDLFKLLKKMPKGAVLHAHDTALCSTAAIIN----LTYYEHLWSCQQD 176
                 :..::|    |..|             .|.|      .||.:|    |.:.::.:..:.|
  Rat   340 -----RDFYNV----RKVD-------------THIH------AAACMNQKHLLRFIKYTYQTEPD 376

  Fly   177 G------------------------DLSASAL----------RF----SKDKPQALSDCDWSLLS 203
            .                        ||:..:|          ||    ||..|...|:     |.
  Rat   377 RTVAEKLGRKITLRQVFDSLHMDPYDLTVDSLDVHAGRQTFHRFDKFNSKYNPVGASE-----LR 436

  Fly   204 DVRAKYGADKVDDYLA----ERLTLYPTKKFEDNNAAWS-TFMSIFNLLDGLVMYAPVWADYYYK 263
            |:..     |.::||.    .|:.....::.||:...:| ..:||:..           :...:.
  Rat   437 DLYL-----KTENYLGGEYFARMVKEVARELEDSKYQYSEPRLSIYGR-----------SPKEWS 485

  Fly   264 ALEEFYEDGVLY---LEFRSVVPTLYDMDGTEFTPMDTVRIYVETLEKFKEAHPDFIGSRM--IY 323
            :|..::....:|   :.:...||.:||                  :.:.|:..|.| |..:  |:
  Rat   486 SLARWFIQHKVYSPNMRWIIQVPRIYD------------------IFRSKKLLPSF-GKMLENIF 531

  Fly   324 APIRYTNAEGVTGYIQTLKQIKEK----YPEFVAGFDLVGQEEM--------GRPLRDFVDELLS 376
            .|:          :..|:.....:    :.::|.|||.|..|..        ..|..|......:
  Rat   532 LPL----------FQATINPQDHRELHLFLKYVTGFDSVDDESKHSDHMFSDKSPSPDLWTSEQN 586

  Fly   377 IPDDIDFYF------------------------HAGETNWFGSTVDENLIDAILLGTKRIGHGFG 417
            .|.....|:                        |.||.   ||..  :|:.|.|. ...|.||..
  Rat   587 PPYSYYLYYMYANIMVLNNLRRERGLSTFLFRPHCGEA---GSIT--HLVSAFLT-ADNISHGLL 645

  Fly   418 LVKHPVVLDMLKKLNVAIEVNPISNQVLQLVSDFRNHPCSHFFADGYPVVISSDDPSFWKAT--P 480
            |.|.||:..:.....:.|.::|:||..|.|  ::..:|...|...|..|.:|:|||..:..|  .
  Rat   646 LKKSPVLQYLYYLAQIPIAMSPLSNNSLFL--EYSKNPLREFLHKGLHVSLSTDDPMQFHYTKEA 708

  Fly   481 LTHDFYIAFLGIASQHSDLRL--LKKLALNSIQYSSLT 516
            |..::     .||:|...|..  |.::|.||:..|.|:
  Rat   709 LMEEY-----AIAAQVWKLSTCDLCEIARNSVLQSGLS 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-ANP_524130.1 A_deaminase_N 54..139 CDD:285627 22/84 (26%)
adm_rel 66..538 CDD:273620 107/543 (20%)
ADGF 119..531 CDD:238646 94/490 (19%)
Ampd3NP_113732.2 AMP_deaminase 181..787 CDD:273618 114/558 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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