DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-B and ampd2b

DIOPT Version :9

Sequence 1:NP_649006.2 Gene:Adgf-B / 39975 FlyBaseID:FBgn0036751 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_009302285.3 Gene:ampd2b / 571355 ZFINID:ZDB-GENE-070713-5 Length:830 Species:Danio rerio


Alignment Length:571 Identity:114/571 - (19%)
Similarity:178/571 - (31%) Gaps:227/571 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 HVAISCRRALTKCAKIGHTTVSVSRSLRKLSPTAFKTLRQAIAKVGHLNIMGQKIRLNDRELAAN 70
            |:.::..:.|....|:.|..              |..:|:....:...:.|.||..|...:.|..
Zfish   341 HILLNEMKELAAQKKVPHRD--------------FYNIRKVDTHIHASSCMNQKHLLRFIKRAMK 391

  Fly    71 KVIMAVKKEEISKGILDPSQFTPGQHIFKTLAEVQKSPIFNLIKGMPKGGALHAHDTALCSTDYL 135
            |....:...|..:|              :||.||.:|  .||.          |.|.::.:.|  
Zfish   392 KYPGEIVHVEQGRG--------------QTLTEVFES--MNLT----------AFDLSVDTLD-- 428

  Fly   136 ISLTYRKNLWICTAEEGCKAIAFRFSKEEPKEKPVKESIW---------------------EPME 179
              :...:|.:            .||.|...|..|:.|||.                     |.|.
Zfish   429 --MHADRNTF------------HRFDKFNSKYNPIGESILREIFIKTDNHIEGKYFGHIIKEVMA 479

  Fly   180 EFRERRGEENVTKY--LTRRFSMYPFS--------------KFISNNQAWAHFMGIFILLDGLLC 228
            :..|       :||  :..|.|:|..|              |..|:|..|             |.
Zfish   480 DLEE-------SKYQNVELRLSIYGRSRDEWDKLAQWAVTHKVYSDNVRW-------------LV 524

  Fly   229 HAPIWAEYYY--NALKEFAEDGVQYLELRSLLPPLYCIDGDMLTIRDTVAIYNSELERFRADHPD 291
            ..|...:.|:  ..|..|.|      .|.::..||:                  |:....:.|| 
Zfish   525 QVPRLFDVYHTKKQLSNFQE------MLANIFMPLF------------------EVTVNPSSHP- 564

  Fly   292 FIGSKLIYAPLRGVEPSVVEQYVKTAVELNKEFPNFMVGFDLVGQEELGRP-----LIDFVEPL- 350
                                       ||:. |...:||||.|..|  .:|     .:|..:|: 
Zfish   565 ---------------------------ELHL-FLQHVVGFDSVDDE--SKPEHHIFNLDSPKPVN 599

  Fly   351 -------------------------LKMPEHINFYF---HAGETNWFGSPIDENLVDAILLGTKR 387
                                     |:...::|.:.   |.||    ..|| .:||...:| ::.
Zfish   600 WTDEDNPPYSYYLYYMYANMTVLNHLRRQRNMNSFVLRPHCGE----AGPI-HHLVSGFML-SEN 658

  Fly   388 IGHGYAITKHPMMMRLAKLLGIAIEVCPVSNQVLQLGVDYRNHPAALLLAANVPIVISSDDPSFW 452
            |.||..:.|.|::..|..|..|.|.:.|:||..|.|  .|..:|....|:..:.:.:|:|||..:
Zfish   659 ISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFL--SYHRNPLPEYLSRGLMVSLSTDDPLQF 721

  Fly   453 HCA--PLSHDFYFAFLGIAPMKADLRFLKS-----LAINSIRYSALVGEEK 496
            |..  ||..::..|        |.:..|.|     ||.||:..|....:.|
Zfish   722 HFTKEPLMEEYSIA--------AQVWKLSSCDMCELARNSVLMSGFSNQVK 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-BNP_649006.2 A_deaminase_N 36..113 CDD:285627 16/76 (21%)
adm_rel 56..515 CDD:273620 108/521 (21%)
ADGF 93..507 CDD:238646 100/484 (21%)
ampd2bXP_009302285.3 AMPD 307..803 CDD:238644 114/571 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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