DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-B and ampd1

DIOPT Version :9

Sequence 1:NP_649006.2 Gene:Adgf-B / 39975 FlyBaseID:FBgn0036751 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_017212786.1 Gene:ampd1 / 393867 ZFINID:ZDB-GENE-040426-1906 Length:723 Species:Danio rerio


Alignment Length:639 Identity:115/639 - (17%)
Similarity:184/639 - (28%) Gaps:271/639 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 IRLNDRELAANKVIMAVK-KEEISKGILDPSQFTPGQHIFKTLAEVQKS-----PIFNLIKGMPK 118
            :.::|.|||...:..|:. :|:..:..|.....||.|.:.|...|..|.     |:|.   .:||
Zfish   105 VTMDDFELACKGLYRALTIREKYMRMALQRFPNTPSQFLRKIEGETWKPEDQVLPVFT---PLPK 166

  Fly   119 GGALHAHDTALCSTDYLISLTYRKNLWICTAEEGCKAI---AFRFSKEEPKEKP----------- 169
            .|     :...|:.|:..:|.|     :...::|...:   |....|.:|...|           
Zfish   167 PG-----EDPFCTKDFPPNLGY-----VARMKDGVIYVYKDAAAADKHQPLNHPGPDLATFIDDM 221

  Fly   170 ----------------------------VKESIWEPMEEFRE----------------------- 183
                                        |.|.:.| |||.:|                       
Zfish   222 NFLIALIAQGPTKTYTHRRLKFLMSKFNVHEMLNE-MEEMKELKKNPHRDFYNCRKVDTHIHAAA 285

  Fly   184 -------------------------RRGEENVTKYLTRRFSMYPFSKFISNNQAWAHFMGIFILL 223
                                     .:|:|...|.|....:::|:.                :.:
Zfish   286 CMNQKHLLRFIKKSYRVDADRVVHVLKGKEVTLKELFASLNLHPYD----------------LTV 334

  Fly   224 DGLLCHA----------------PIWA----------------EYYYNALKEFAED----GVQYL 252
            |.|..||                |:.|                ||:...:||.|.|    ..||.
Zfish   335 DSLDVHAGRQTFQRFDKFNAKYNPVGASELRDLYMKTENHISGEYFATIIKEVASDLEDARYQYA 399

  Fly   253 ELRSLL-------------------------------PPLYCIDGDMLTIRDTVAIYNSELERFR 286
            |.|..:                               |.:|    |:...|:.|..:...||.  
Zfish   400 EPRLSIYGCNPNEWAKLSSWFNKHRVFSPHLKWMIQVPRIY----DIFRGRNFVPHFGKMLEN-- 458

  Fly   287 ADHPDFIGSKLIYAPL--RGVEPSVVEQYVKTAVELNKEFPNFM---VGFDLVGQE-ELGRPLID 345
                       |:.|:  ..::|:           .|.|...|:   .|||.|..| :....:..
Zfish   459 -----------IFLPVFQATIDPN-----------SNPELSVFLKHVTGFDSVDDESKHSGHMFS 501

  Fly   346 FVEP------LLKMPEHI-----------------------NFYF--HAGETNWFGSPIDENLVD 379
            ...|      ::|.|.:.                       .|.|  |.||    ...:...|  
Zfish   502 TKSPKPEEWDIVKNPSYTYWIYYMYANIAILNQLRKERGMNTFQFRPHCGE----AGAVTHLL-- 560

  Fly   380 AILLGTKRIGHGYAITKHPMMMRLAKLLGIAIEVCPVSNQVLQLGVDYRNHPAALLLAANVPIVI 444
            |..:....|.||..:.|.|::..|..|..:.|.:.|:||..|.|  :|..:|........:.:.:
Zfish   561 ACFMTADNISHGLNLKKSPVLQYLYYLAQVPIAMSPLSNNSLFL--EYNKNPLLEFHKKGLMVSL 623

  Fly   445 SSDDPSFWHCA--PLSHDFYFAFLGIAPMKADLRFLKSLAINSIRYSALVGEEK 496
            |:|||..:|..  ||..::..|   ....|.....:..:|.||:..|.|..|||
Zfish   624 STDDPMQFHYTKEPLMEEYAIA---AQVFKLSTCDMCEIARNSVLQSGLSAEEK 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-BNP_649006.2 A_deaminase_N 36..113 CDD:285627 15/58 (26%)
adm_rel 56..515 CDD:273620 115/639 (18%)
ADGF 93..507 CDD:238646 107/605 (18%)
ampd1XP_017212786.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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