DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adgf-B and Ampd3

DIOPT Version :9

Sequence 1:NP_649006.2 Gene:Adgf-B / 39975 FlyBaseID:FBgn0036751 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_113732.2 Gene:Ampd3 / 25095 RGDID:2111 Length:801 Species:Rattus norvegicus


Alignment Length:385 Identity:88/385 - (22%)
Similarity:131/385 - (34%) Gaps:118/385 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 RFSMYPFSKFIS--NNQAWAHFMGIFILLDGLLCHAPIWAEYYYNALKEFA---EDG-VQYLELR 255
            |.:.:.|.||.|  |....:....:::..:..|     ..||:...:||.|   ||. .||.|.|
  Rat   414 RQTFHRFDKFNSKYNPVGASELRDLYLKTENYL-----GGEYFARMVKEVARELEDSKYQYSEPR 473

  Fly   256 SLLPPLYCIDGDMLTIRDTVAIYN------SELERFRADH------------------------- 289
                               ::||.      |.|.|:...|                         
  Rat   474 -------------------LSIYGRSPKEWSSLARWFIQHKVYSPNMRWIIQVPRIYDIFRSKKL 519

  Fly   290 -PDFIGSKL--IYAPLRGVEPSVVEQYVKTAVELNKEFPNFMVGFDLVGQEEL--------GRPL 343
             |.| |..|  |:.||  .:.::..|..:   ||:. |..::.|||.|..|..        ..|.
  Rat   520 LPSF-GKMLENIFLPL--FQATINPQDHR---ELHL-FLKYVTGFDSVDDESKHSDHMFSDKSPS 577

  Fly   344 IDFVEPLLKMPEHINFYF------------------------HAGETNWFGSPIDENLVDAILLG 384
            .|........|.....|:                        |.||.   ||  ..:||.|.|. 
  Rat   578 PDLWTSEQNPPYSYYLYYMYANIMVLNNLRRERGLSTFLFRPHCGEA---GS--ITHLVSAFLT- 636

  Fly   385 TKRIGHGYAITKHPMMMRLAKLLGIAIEVCPVSNQVLQLGVDYRNHPAALLLAANVPIVISSDDP 449
            ...|.||..:.|.|::..|..|..|.|.:.|:||..|.|  :|..:|....|...:.:.:|:|||
  Rat   637 ADNISHGLLLKKSPVLQYLYYLAQIPIAMSPLSNNSLFL--EYSKNPLREFLHKGLHVSLSTDDP 699

  Fly   450 SFWHCA--PLSHDFYFAFLGIAPMKADLRFLKSLAINSIRYSALVGEEKR--VGYRKWQE 505
            ..:|..  .|..::..|   ....|.....|..:|.||:..|.|..:||:  :|...::|
  Rat   700 MQFHYTKEALMEEYAIA---AQVWKLSTCDLCEIARNSVLQSGLSHQEKQKFLGQNYYKE 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-BNP_649006.2 A_deaminase_N 36..113 CDD:285627
adm_rel 56..515 CDD:273620 88/385 (23%)
ADGF 93..507 CDD:238646 88/385 (23%)
Ampd3NP_113732.2 AMP_deaminase 181..787 CDD:273618 88/385 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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