DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6034 and Kdm1a

DIOPT Version :9

Sequence 1:NP_649005.1 Gene:CG6034 / 39974 FlyBaseID:FBgn0036750 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_006539392.1 Gene:Kdm1a / 99982 MGIID:1196256 Length:877 Species:Mus musculus


Alignment Length:616 Identity:148/616 - (24%)
Similarity:233/616 - (37%) Gaps:210/616 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KETAKIVIIGAGASGVAAATKLLEQGFKNVLLFEAEDRIGGRINTILFANSLIDLGAQWCHGEEG 78
            |:|.|::|||:|.||:|||.:|...|. :|.|.||.||:|||:.|....|.:.||||....|..|
Mouse   297 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGG 360

  Fly    79 N---VVYEKV--------------------------KDLD---------VLDRTGDYVVHFIRSN 105
            |   ||.::|                          |:.|         :|:.| .|:.|.:..|
Mouse   361 NPMAVVSKQVNMELAKIKQKCPLYEANGQADTVKVPKEKDEMVEQEFNRLLEAT-SYLSHQLDFN 424

  Fly   106 KEILTDVHNKALTELTNAFEVPGE-HEGSVGDAFNAYWKENIHQLVPNDKTIAKEAQDCLKKVIC 169
                  |.|.....|..|.||..: .|..|.|....:||:.:       || .:|.::.|.|:: 
Mouse   425 ------VLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIV-------KT-QEELKELLNKMV- 474

  Fly   170 SMDACDNLSELSYRNFR-------------NFAIAGGDQNLSWRQKGY----------------- 204
              :..:.:.|| ::.::             .|.:....::|:...|.|                 
Mouse   475 --NLKEKIKEL-HQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQEL 536

  Fly   205 -------------------WKF----------LSVLLNSSDNQPGDQGILKGH------------ 228
                               |.|          ||.|.....:|..|......|            
Mouse   537 EANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPV 601

  Fly   229 -------VHLNKRIAKINWEGDG----ELTLRCWNGQFV-SADHVICTVSLGVLREKHHKL-FVP 280
                   :.||..:.::.:...|    .:..|..:..|: ..|.|:||:.||||:::...: |||
Mouse   602 ALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVP 666

  Fly   281 ALPASKIRSIEGLKLGTVNKFYLEFEEQPVPENIREMAFLWLEEDLKELRSGKYFWLESVCYFHR 345
            .||..|..:::.:..|.:||..|.|:                          :.||..||..|..
Mouse   667 PLPEWKTSAVQRMGFGNLNKVVLCFD--------------------------RVFWDPSVNLFGH 705

  Fly   346 VDC---------------QPRLLQGWIIGAHSRYVETISEE-------QVLEGIMWMFRKFLKFS 388
            |..               :..:|...:.|..:..:|.||::       .:|:||      |...:
Mouse   706 VGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGI------FGSSA 764

  Fly   389 VPYPKNFLRSQWQSNPNFRGSYSY---------YSTYADELRTGRTDLASPLVDVTGRPRIQFAG 444
            ||.||..:.|:|:::|..||||||         |...|..:..|.:...:|    ...||:.|||
Mouse   765 VPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAP----QPIPRLFFAG 825

  Fly   445 EASSRNHFSTVHGAIESGWREAERLNEFYEG 475
            |.:.||:.:|||||:.||.|||.|:.:.:.|
Mouse   826 EHTIRNYPATVHGALLSGLREAGRIADQFLG 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6034NP_649005.1 Amino_oxidase 33..470 CDD:279874 135/590 (23%)
NAD_binding_8 <35..88 CDD:290186 24/81 (30%)
Kdm1aXP_006539392.1 PHA03378 <39..>99 CDD:223065
PLN02328 204..850 CDD:215187 146/608 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0685
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2622
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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