DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6034 and smox

DIOPT Version :9

Sequence 1:NP_649005.1 Gene:CG6034 / 39974 FlyBaseID:FBgn0036750 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001039135.1 Gene:smox / 733959 XenbaseID:XB-GENE-5840847 Length:534 Species:Xenopus tropicalis


Alignment Length:522 Identity:164/522 - (31%)
Similarity:255/522 - (48%) Gaps:85/522 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KIVIIGAGASGVAAATKLLEQGFKNVLLFEAEDRIGGRINTILFANSLIDLGAQWCHGEEGNVVY 82
            :|||||||.:|::||..|||:||.:|.:.||.||||||:.:|...::..:|||.|.||..||.:|
 Frog    26 RIVIIGAGLAGLSAAKTLLEKGFTDVTILEASDRIGGRVQSIKLEHATFELGATWIHGSNGNPIY 90

  Fly    83 EKVKDLDVLDRTGD----------Y----VVHFI-----RSNKEIL---TDVHNKA--LTE--LT 121
            ...:|..:|:.|.|          |    |.|::     |..|:::   :||:|:.  ||:  ..
 Frog    91 HLAEDNGLLEETTDGERSVGRISLYSKNGVAHYLTNSGHRIPKDLVEEFSDVYNEVYNLTQEFFQ 155

  Fly   122 NAFEVPGEHEGSVG----DAFNAYWKENIHQLVPNDKTIAKEAQDCLKKVICSMDACD----NLS 178
            |...|..|.:.|||    |......||:     |:|....|:.:..:.:....:::|:    ::.
 Frog   156 NGKPVNAESQNSVGVFTRDVVRKRIKED-----PDDSESTKKLKLAMVQQFLKVESCESSSHSMD 215

  Fly   179 ELSYRNFRNFAIAGGDQNLSWRQKGYWKFLSVLLNSSDNQPGDQGILKGHVHLNKRIAKINW--- 240
            |:|...|..:....|..::.  ..|:.:.:.:|.:|         :.|..:.|.|.:..::|   
 Frog   216 EVSLSEFGEWTEIPGAHHVI--PCGFIRIVEILSSS---------VPKSLIQLRKPVKCVHWNRS 269

  Fly   241 ----------------EGDG-ELTLRCWNGQFVSADHVICTVSLGVLREKHHKLFVPALPASKIR 288
                            |..| .:.:.|.:.:|::|||||.|.||||:::.|..||.|:||..|:.
 Frog   270 IRKQIDRVADHNNDQVEDKGYPVFVECEDYEFIAADHVIVTASLGVMKKFHETLFRPSLPEEKVT 334

  Fly   289 SIEGLKLGTVNKFYLEFEEQPVPENIREMAFLWLEEDLKELRSGKY---FWLESVCYFHRVDCQP 350
            :|:.|.:.|.:|.:|||||.........:.|:|  ||..|..|..|   .|.:.:|.|..:....
 Frog   335 AIDKLGISTTDKIFLEFEEPFWSPECNSIQFVW--EDEAESESLTYPEELWYKKICSFDVLYPPE 397

  Fly   351 R---LLQGWIIGAHSRYVETISEEQVLEGIMWMFRKFL-KFSVPYPKNFLRSQWQSNPNFRGSYS 411
            |   :|.|||.|..:..:|...:|.|.|....:.|||. ..::|.|:..:||.|.|||.|.||||
 Frog   398 RYGYVLSGWICGEEALIMEKYDDETVAETCTELLRKFTGNPNIPKPRRIMRSSWGSNPYFFGSYS 462

  Fly   412 YYSTYADELRTGRTDLASPL----VDVTGRPRIQFAGEASSRNHFSTVHGAIESGWREAERLNEF 472
            |  |...........||.||    ...|...::.|:|||:.|.::||.|||:.||.|||:||.|.
 Frog   463 Y--TQVGSSGEDVEKLAKPLPYTESSKTAPLQVMFSGEATHRKYYSTTHGALLSGQREADRLAEM 525

  Fly   473 YE 474
            |:
 Frog   526 YQ 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6034NP_649005.1 Amino_oxidase 33..470 CDD:279874 151/501 (30%)
NAD_binding_8 <35..88 CDD:290186 24/52 (46%)
smoxNP_001039135.1 PLN02568 23..526 CDD:215308 163/519 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D375579at33208
OrthoFinder 1 1.000 - - FOG0000632
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10742
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2622
SonicParanoid 1 1.000 - - X429
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.050

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