DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6034 and shps

DIOPT Version :9

Sequence 1:NP_649005.1 Gene:CG6034 / 39974 FlyBaseID:FBgn0036750 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster


Alignment Length:523 Identity:94/523 - (17%)
Similarity:173/523 - (33%) Gaps:202/523 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IVIIGAGASGVAAATKLL--EQGFKNVLLFEAEDRIGGRINTILFANS--LIDLGAQWCHGEEGN 79
            ::|:|.|.||:|:|.|:|  |...| |.:.||.|.:||    ::..||  |:|...|        
  Fly    14 VLIVGGGLSGLASALKILAMESTLK-VRMIEASDALGG----LMGQNSTRLVDAAQQ-------- 65

  Fly    80 VVYEKVKDLDVLDRTGDYVVHFIRSNKEILTDVH-------------------NKALTELTNAFE 125
                     |:|               .:||.:|                   ::.||.:...||
  Fly    66 ---------DML---------------ALLTLIHLSPRRRRSISGSLRRCWDLDRGLTAMPAKFE 106

  Fly   126 VPGEHEGSVGDAFNAYWKE------NIHQLVPNDKTIAKEAQDC--------------LKKVICS 170
            :     |...|..:....:      |:.:.|.|     .|...|              |.:::|.
  Fly   107 L-----GRYIDMLDLRMPKFRSKRFNLRERVSN-----MEQHICHHLFFSKSRNFMLNLVQLVCG 161

  Fly   171 MDACDNLSELSYRNFRNFAIAGGDQNLSWRQKGYWKFLSVLLNSSDNQPGD----------QGIL 225
            :.|    :|:.|..|.:...:.|.             |.||::.....|..          :.||
  Fly   162 VPA----NEVDYDVFMSVCSSCGG-------------LKVLIDFYFTYPTSFYEISTQMLIENIL 209

  Fly   226 KG----HVHLNKRIAKI-NWEGDGELTLRCWNGQFVSADHVICTVSLGVLREKHHKLFVPALPAS 285
            :.    .:.||.|..:: :::...::|..  .|...:|...|..:....:::.|.:..:|.:...
  Fly   210 EQLQFIKIILNCRAVRLEHFKNYVQVTDD--QGNKHTAQAAILAIPWNKVQKLHFEPRIPKVFLP 272

  Fly   286 KIRSIEGLK-LGTVNKFYLEFEEQPVPENIREMAFLWLEEDLKELRSGKYFWLESVCYFHRVDCQ 349
            :..|..|.| ...:::|                          :||.||..|.:.....:.:..|
  Fly   273 RTTSRSGRKGRQVISQF--------------------------QLRYGKSVWTDLGYSGNFLSSQ 311

  Fly   350 PRLLQGWIIGAHS-------RYVETISEEQ--VLEGIMWMFRKFLKFSVPYPKNFLRSQWQSNPN 405
            |      ::..|.       .||..:.|:|  ||:.::.:..:.....:..|   |..|      
  Fly   312 P------MVSGHECRMSSFCGYVLHLPEDQDEVLQDVVDLLAEHFGEEMRQP---LECQ------ 361

  Fly   406 FRGSYSYYSTYADELRTGRTDLASPLVDVTGRPR-------IQFAGEASSRNHFSTVHGAIESGW 463
                     .:.|||...:           .:|:       |..:..|...::.|.:.||::||:
  Fly   362 ---------CFTDELNVAQ-----------HKPQTKPWHRVIWSSSSAVGTSYRSLMGGAVQSGF 406

  Fly   464 REA 466
            |.|
  Fly   407 RAA 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6034NP_649005.1 Amino_oxidase 33..470 CDD:279874 87/509 (17%)
NAD_binding_8 <35..88 CDD:290186 14/56 (25%)
shpsNP_651239.1 NADB_Rossmann 11..>53 CDD:304358 17/43 (40%)
Amino_oxidase 21..409 CDD:279874 90/514 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452791
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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