DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6034 and Su(var)3-3

DIOPT Version :9

Sequence 1:NP_649005.1 Gene:CG6034 / 39974 FlyBaseID:FBgn0036750 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_649194.1 Gene:Su(var)3-3 / 40217 FlyBaseID:FBgn0260397 Length:890 Species:Drosophila melanogaster


Alignment Length:617 Identity:158/617 - (25%)
Similarity:248/617 - (40%) Gaps:203/617 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KETAKIVIIGAGASGVAAATKLLEQGFKNVLLFEAEDRIGGRINTILFANSLIDLGA-------- 70
            |:..|:::||||.||:|.|.:|.:.|. :|::.||.||:||||:|....:.:.|:||        
  Fly   262 KKLGKVIVIGAGISGLAVAHQLQQFGM-DVIVLEARDRVGGRISTFRKNSYIADVGAMVVTGVYG 325

  Fly    71 ------------------QWC--HGEEGNVVYEKVKDLDVLDR-------TGDYVVHFIRSN--- 105
                              |.|  :|.:|..| .|.|| ||::|       :..|:.|.:..|   
  Fly   326 NPMTILSKQIGMDLVPIQQTCPLYGPDGKPV-PKEKD-DVIEREFNRLLESASYLSHRLDFNYAG 388

  Fly   106 -----------------------------KEIL---TDV--HNKALTELTNAF-EVPGEH----- 130
                                         :||:   |.:  ..:.|..|.:.. ::..||     
  Fly   389 DCPVSLGDALEWIISMQEMQVMHKRGQHMQEIIATQTKIIEQRRRLKTLRDTIGKLKNEHLAMIN 453

  Fly   131 ----EGSVGDAFNAYWKENIHQL-VPNDKTI-------AKEAQDCLKKVICSMDACDNLSELSYR 183
                :|:.||....|.:.||... :..::||       |:|.|...|           |.||...
  Fly   454 QRKPKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAK-----------LHELEQN 507

  Fly   184 -----------------NFRN--FAIAGGDQNLS---WRQKGYWKFLSVLLNSSDNQPGDQGILK 226
                             :|.|  ||.|....|||   |.|...::|:                  
  Fly   508 RPSDVYLSSRDRLILDWHFANLEFANATRLNNLSLKHWDQDDDFEFI------------------ 554

  Fly   227 GH--------------------VHLNKRIAKINWEGDG-EL---TLRCWNGQFV-SADHVICTVS 266
            ||                    :.:|..:.:|.:...| |:   .|:..|.|.. .||.|:||::
  Fly   555 GHHTTVRNGYSCVPVALTENLDIRVNSAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVVCTLT 619

  Fly   267 LGVLR---------EKHHKLFVPALPASKIRSIEGLKLGTVNKFYLEFEEQPVPENIREMAFLWL 322
            ||||:         :.:...|.|.||..|.::|:.|..|.:||..|.|:......|    |.|:.
  Fly   620 LGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPN----ANLFG 680

  Fly   323 EEDLKELRSGKYFWLESVCYFHRVDCQPRLLQGWIIGAHSRYVETISEEQVLEGIMWMFRK-FLK 386
            .........|:.|      .|..:...|.|| ..:.|..:..||:::::.::...|.:.:. |..
  Fly   681 HVGSTTASRGEMF------LFWSISSSPVLL-ALVAGMAANLVESVTDDIIIGRCMSVLKNIFGN 738

  Fly   387 FSVPYPKNFLRSQWQSNPNFRGSYSYYSTYADELRTGRTD---LASPLV-----DVTGRPRIQFA 443
            .|||.||..:.::|:|:|..||||||.|     :.:..:|   ||:|::     |..|.||:.||
  Fly   739 TSVPQPKETVVTRWRSDPWARGSYSYVS-----VGSSGSDYDLLAAPVIPPSSKDAEGLPRLFFA 798

  Fly   444 GEASSRNHFSTVHGAIESGWREAERLNEFYEG 475
            ||.:.||:.:|||||..||.|||.|:.::|.|
  Fly   799 GEHTIRNYPATVHGAYLSGLREAGRIADYYLG 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6034NP_649005.1 Amino_oxidase 33..470 CDD:279874 146/591 (25%)
NAD_binding_8 <35..88 CDD:290186 22/80 (28%)
Su(var)3-3NP_649194.1 SWIRM 165..250 CDD:282311
NAD_binding_8 269..327 CDD:290186 23/58 (40%)
Amino_oxidase 274..824 CDD:279874 149/597 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452795
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46708
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10742
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2622
SonicParanoid 00.000 Not matched by this tool.
54.970

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