DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6034 and Smox

DIOPT Version :9

Sequence 1:NP_649005.1 Gene:CG6034 / 39974 FlyBaseID:FBgn0036750 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_006235125.1 Gene:Smox / 308652 RGDID:1306049 Length:585 Species:Rattus norvegicus


Alignment Length:569 Identity:154/569 - (27%)
Similarity:245/569 - (43%) Gaps:130/569 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KIVIIGAGASGVAAATKLLEQGFKNVLLFEAEDRIGGRINTILFANSLIDLGAQWCHGEEGNVVY 82
            ::|:||||.:|:|||..||||||.:|.:.||...||||:.::...::..:|||.|.||..||.:|
  Rat    26 RVVVIGAGLAGLAAARALLEQGFTDVTVLEASSHIGGRVQSVKLGHATFELGATWIHGSHGNPIY 90

  Fly    83 EKVKDLDVLDRTGD------------------YVVH--------FIRSNKEILTDVHNKALTELT 121
            :..:...:|:.|.|                  |:.:        .:....::..:|:|.......
  Rat    91 QLAEANGLLEETTDGERSVGRISLYSKNGVACYLTNRGRRIPKDVVEEFSDLYNEVYNLTQEFFR 155

  Fly   122 NAFEVPGEHEGSVGDAFNAYWKENIHQLV---PNDKTIAKEAQDCLKKVICSMDACD----NLSE 179
            |...|..|.:.|||    .:.:|.:...:   |:|....|..:..:.:....:::|:    ::.|
  Rat   156 NGKPVNAESQNSVG----VFTREKVRNRIRDDPDDTEATKRLKLAMIQQYLKVESCESSSHSIDE 216

  Fly   180 LSYRNFRNFAIAGGDQNLSWRQKGYWKFLSVLLNSSDNQPGDQGILKGHVHLNKRIAKINW---- 240
            :|...|..:....|..::.  ..|:.:.:.:|.         :||....:.|.|.:..|:|    
  Rat   217 VSLSAFGEWTEIPGAHHII--PSGFMRVVELLA---------KGIPPHVIQLGKPVRCIHWDQAS 270

  Fly   241 ------------EGD-----------GE--------------LTLRCWNGQFVSADHVICTVSLG 268
                        |||           ||              :.:.|.:.:.:.|||||.|||||
  Rat   271 ARPRGPEIEPRGEGDHNHDAGEGGQSGENPQQGRWDEDEQWPVVVECEDCEVIPADHVIVTVSLG 335

  Fly   269 VLREKHHKLFVPALPASKIRSIEGLKLGTVNKFYLEFEEQPVPENIREMAFLWLEEDLKELRSGK 333
            ||:.::...|.|.||..|:.:|..|.:||.:|.:|||||.........:.|:|  ||..|..:..
  Rat   336 VLKRQYTSFFRPCLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQFVW--EDEAESCTLT 398

  Fly   334 Y---FWLESVCYF---HRVDCQPRLLQGWIIGAHSRYVETISEEQVLEGIMWMFRKFL-KFSVPY 391
            |   .|...:|.|   :..:....:|.|||.|..:..:|...:|.|.|....|.|:|. ..::|.
  Rat   399 YPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMERCDDEAVAEICTEMLRQFTGNPNIPK 463

  Fly   392 PKNFLRSQWQSNPNFRGSYSYYST---------------YADELRTGRTD---------LASPLV 432
            |:..|||.|.|||.|||||||...               |.:..:|....         |:|...
  Rat   464 PRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYTESSKTAHGSSTKQQPGHLLSSKCP 528

  Fly   433 DVTGRP--------RIQFAGEASSRNHFSTVHGAIESGWREAERLNEFY 473
            :.:..|        ::.|:|||:.|.::||.|||:.||.|||.||.|.|
  Rat   529 EQSLDPSRGSIKPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMY 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6034NP_649005.1 Amino_oxidase 33..470 CDD:279874 142/549 (26%)
NAD_binding_8 <35..88 CDD:290186 22/52 (42%)
SmoxXP_006235125.1 NAD_binding_8 <45..88 CDD:290186 18/42 (43%)
PLN02568 50..578 CDD:215308 139/545 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343427
Domainoid 1 1.000 138 1.000 Domainoid score I4710
eggNOG 1 0.900 - - E1_KOG0685
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D375579at33208
OrthoFinder 1 1.000 - - FOG0000632
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102123
Panther 1 1.100 - - O PTHR10742
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X429
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.750

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