DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6034 and Lao1

DIOPT Version :9

Sequence 1:NP_649005.1 Gene:CG6034 / 39974 FlyBaseID:FBgn0036750 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001100152.1 Gene:Lao1 / 298483 RGDID:1310787 Length:519 Species:Rattus norvegicus


Alignment Length:527 Identity:111/527 - (21%)
Similarity:203/527 - (38%) Gaps:140/527 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KIVIIGAGASGVAAATKLLEQGFKNVLLFEAEDRIGGRINTILFANSLIDLGAQWCHGEEG---- 78
            :||::|||.:|:.|| |||:.....|.:.||.:.||||:.|      |.:....| |.|.|    
  Rat    59 RIVVVGAGMAGLVAA-KLLQDAGHEVTILEASNHIGGRVVT------LRNKEEGW-HFELGPMRI 115

  Fly    79 ----NVVYEKVKDLDVLDRTGDYVVHFIRSNKEILTDVHNKALTELTNAFEVPGEHEGSVGDAFN 139
                .:::..::...:  :..::..|  .:|...|...|....:|:....|:.|           
  Rat   116 PESHRIIHTYIQKFGL--KLNNFTQH--DNNTWYLLRGHRYRASEVKANPEILG----------- 165

  Fly   140 AYWKENIHQLVPNDKTIAKEAQDCLKKVICSMDA--CDNLSELSYRNFRNFAIAGGDQNLSWRQK 202
                   :.|.|::|.  |.|:|...:.|..:.|  |..|..| |.::...|....:..||   :
  Rat   166 -------YPLRPSEKN--KTAEDLFYQAITKVKASNCSQLLSL-YDSYSTKAYLLKEGMLS---R 217

  Fly   203 GYWKFLSVLLNSS------------------------------DNQPG--DQGILKGHVHLNKRI 235
            |..:.:..::|.:                              |..|.  :..:..|.:||..::
  Rat   218 GAVEMIGDMMNENAGFYRSLLESLRIANIFTKNDQFTEITGGFDQLPNSLNDSLKPGTIHLGSKV 282

  Fly   236 ---------AKINWEGDGELTLRCWNGQFVSADHVICTVSLGVLREKHHKL--FVPALPASKIRS 289
                     .::.:..||. |...:|   ::||:||.:.|     .|..:|  |.|.|...|||:
  Rat   283 ERVVGNESKVEVLYRTDGP-TSALYN---LTADYVIISAS-----AKATRLIAFQPPLSPEKIRA 338

  Fly   290 IEGLKLGTVNKFYLEFEEQPVPENIREMAFLWLEEDLK-----ELRSGKYFWLESVCYFHRVDCQ 349
            :..:...:..|......|:           .|.::.:.     ..|..::.:..|   :.|...:
  Rat   339 LRSVHYNSATKVIFVCNER-----------FWEKDGIHGGYSITDRPSRFIYYPS---YSRPSSK 389

  Fly   350 PRLLQGWIIGAHSRYVETISEEQVLEGIM-------WMFRKFLKFSVPYPKNFLRSQWQSNPNFR 407
            ..||..:.:...|.:...:...||::.|:       .:.::.||...  ||:.:: .|..:|...
  Rat   390 GILLASFTMDDDSFFFTALKPNQVVDIILDDLAAVHLIPKEELKRMC--PKSEVK-HWSLDPFTI 451

  Fly   408 GSYSYYSTY--ADELRTGRTDLASPLVDVTGRPRIQFAGEASSRNHFSTVHGAIESGWREAERLN 470
            |||:.::.|  .|:|:        .|....|  ||.||||.:|..| :.:..||:||.|.|:.:.
  Rat   452 GSYAEFTPYQFLDDLK--------QLSQTEG--RIYFAGEHTSLPH-AWIETAIKSGIRAAKNIQ 505

  Fly   471 EFYEGRA 477
            :..:..|
  Rat   506 DTVDKEA 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6034NP_649005.1 Amino_oxidase 33..470 CDD:279874 102/503 (20%)
NAD_binding_8 <35..88 CDD:290186 15/60 (25%)
Lao1NP_001100152.1 NAD_binding_8 62..>125 CDD:290186 22/70 (31%)
Amino_oxidase 67..504 CDD:279874 105/509 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343398
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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