DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6034 and KDM1A

DIOPT Version :9

Sequence 1:NP_649005.1 Gene:CG6034 / 39974 FlyBaseID:FBgn0036750 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_006710537.1 Gene:KDM1A / 23028 HGNCID:29079 Length:878 Species:Homo sapiens


Alignment Length:610 Identity:157/610 - (25%)
Similarity:239/610 - (39%) Gaps:194/610 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TKETAKIVIIGAGASGVAAATKLLEQGFKNVLLFEAEDRIGGRINTILFANSLIDLGAQWCHGEE 77
            ||:|.|::|||:|.||:|||.:|...|. :|.|.||.||:|||:.|....|.:.||||....|..
Human   295 TKKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLG 358

  Fly    78 GN---VVYEKV----------------------KDLD---------VLDRTGDYVVHFIRSNKEI 108
            ||   ||.::|                      |:.|         :|:.| .|:.|.:..|   
Human   359 GNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEAT-SYLSHQLDFN--- 419

  Fly   109 LTDVHNKALTELTNAFEVPGE-HEGSVGDAFNAYWK-----------------------ENIHQL 149
               |.|.....|..|.||..: .|..|.|....:||                       :.:||.
Human   420 ---VLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQ 481

  Fly   150 V--------PNDKT--------------IAK------EAQDCLKKVICSMDA--------CDNLS 178
            .        |.|.|              :.|      |.|..|::.:..::|        |.:: 
Human   482 YKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSPLFFCSDV- 545

  Fly   179 ELSYR-------NFRN--FAIAGGDQNLS---WRQKGYWKFLS---VLLNSSDNQPGDQGILKG- 227
            .||.|       :|.|  ||.|.....||   |.|...::|..   .:.|.....|  ..:.:| 
Human   546 YLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVP--VALAEGL 608

  Fly   228 HVHLNKRIAKINWEGDG----ELTLRCWNGQFV-SADHVICTVSLGVLREKHHKL-FVPALPASK 286
            .:.||..:.::.:...|    .:..|..:..|: ..|.|:||:.||||:::...: |||.||..|
Human   609 DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWK 673

  Fly   287 IRSIEGLKLGTVNKFYLEFEEQPVPENIREMAFLWLEEDLKELRSGKYFWLESVCYFHRVDC--- 348
            ..:::.:..|.:||..|.|:                          :.||..||..|..|..   
Human   674 TSAVQRMGFGNLNKVVLCFD--------------------------RVFWDPSVNLFGHVGSTTA 712

  Fly   349 ------------QPRLLQGWIIGAHSRYVETISEE-------QVLEGIMWMFRKFLKFSVPYPKN 394
                        :..:|...:.|..:..:|.||::       .:|:||      |...:||.||.
Human   713 SRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGI------FGSSAVPQPKE 771

  Fly   395 FLRSQWQSNPNFRGSYSY---------YSTYADELRTGRTDLASPLVDVTGRPRIQFAGEASSRN 450
            .:.|:|:::|..||||||         |...|..:..|.:...:|    ...||:.||||.:.||
Human   772 TVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAP----QPIPRLFFAGEHTIRN 832

  Fly   451 HFSTVHGAIESGWREAERLNEFYEG 475
            :.:|||||:.||.|||.|:.:.:.|
Human   833 YPATVHGALLSGLREAGRIADQFLG 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6034NP_649005.1 Amino_oxidase 33..470 CDD:279874 143/583 (25%)
NAD_binding_8 <35..88 CDD:290186 24/77 (31%)
KDM1AXP_006710537.1 SWIRM 197..284 CDD:282311
NAD_binding_8 303..361 CDD:290186 28/58 (48%)
Amino_oxidase 308..851 CDD:279874 147/589 (25%)
SurA_N_3 <395..491 CDD:304439 19/102 (19%)
NAT_SF <441..>549 CDD:302625 16/108 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0685
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2622
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

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