DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6034 and amx-3

DIOPT Version :9

Sequence 1:NP_649005.1 Gene:CG6034 / 39974 FlyBaseID:FBgn0036750 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001355373.1 Gene:amx-3 / 184919 WormBaseID:WBGene00000139 Length:450 Species:Caenorhabditis elegans


Alignment Length:510 Identity:133/510 - (26%)
Similarity:216/510 - (42%) Gaps:123/510 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KIVIIGAGASGVAAATKLLEQGFKNVLLFEAEDRIGGRINTILFANSLIDLGAQWCHGEEGNVVY 82
            |:.|||||.:|:.:|....:.|. :..:||..:|||||:....:.:..:..||::.:|.: |.||
 Worm     3 KVCIIGAGLAGLRSAIHFEQVGI-DYTIFEGSNRIGGRVYPFEYQDGYLHFGAEYVNGVD-NEVY 65

  Fly    83 EKVKDLDVLDRTGDYVVHFIRSNKEILTDVHNKALTELTNAFEVPGEHEGSVGDAFNAYWKE--- 144
            ..|:..|:.|:|..      |::...:.|..| ::| |.|...||.:    :.|.||.|.:.   
 Worm    66 NLVEKYDLFDKTKP------RTDDLWMLDQDN-SIT-LVNGHLVPKK----ILDKFNDYIRYLNV 118

  Fly   145 -------NIHQL-VPNDKTIAKEAQDCLKKVICSMDACDNLSEL------SYRNF--RNFAIAGG 193
                   .|:|| |.|:  |..:..:.|:      |..:|..|:      .|:|:  ..::...|
 Worm   119 ALYEKSIKINQLSVENE--INNQFIEFLR------DVPENDHEIYESLINVYKNYFQTEWSSPVG 175

  Fly   194 D---QNLSWRQKGYWKFLSVLLNSSDNQPGDQGILK--------GHVHLNKRIAKINWEGDGELT 247
            :   .|||....|..:..|.:|    |:.|...|||        |::.||..:..:..|.:..:|
 Worm   176 ELSLSNLSIWDDGTEEEDSAVL----NKQGFYEILKDFRSKIPAGNIRLNCEVINVKEEENIMVT 236

  Fly   248 LRCWNGQFVSADHVICTVSLGVLREKHHKLFVPALPASKIRSIEGLKLGTVNKFYLEFEEQPVPE 312
            |:  ||:.:..|..|.|.|||.|::.|..||.|.|.:.|..:|..:..|...|.:||:.:.    
 Worm   237 LK--NGEVLHFDACIVTCSLGYLKKHHKTLFTPQLTSVKQDAINRMGFGNNLKVFLEYSDS---- 295

  Fly   313 NIREMAFLWL-------------EEDLKELRSGKYFWLESVCYFHRVDCQPRLLQGWIIGAHSRY 364
                    |.             .||....:...  |.|::            |..||.|:..:.
 Worm   296 --------WWNSLNTILILTHGENEDFMVFQPSS--WAENI------------LLCWIAGSGPKK 338

  Fly   365 V--ETISEEQVL--EGIMWMFRKFL--KFSVP-YPKNFLRSQWQSNPNFRGSYSYYSTYADELRT 422
            :  :|..|.::|  ..:....:.:|  |.||. |.||::..::.     .|||||       |..
 Worm   339 ICDKTDFELKILLDTHLHDQLKNYLDVKASVKIYRKNWINDEFT-----LGSYSY-------LTP 391

  Fly   423 GR------TDLASPLVDVTGRPRIQFAGEASSRNHFSTVHGAIESGWREAERLNE 471
            |:      ..||.|::. ...|.|.||||.:....:.|..||:.||.|||.|::|
 Worm   392 GQIVGEDICILAQPVLK-DNNPVICFAGEHTDSTMYQTTVGAVRSGLREASRISE 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6034NP_649005.1 Amino_oxidase 33..470 CDD:279874 124/492 (25%)
NAD_binding_8 <35..88 CDD:290186 15/52 (29%)
amx-3NP_001355373.1 Amino_oxidase 11..443 CDD:366721 125/498 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D375579at33208
OrthoFinder 1 1.000 - - FOG0000632
OrthoInspector 1 1.000 - - mtm4748
orthoMCL 1 0.900 - - OOG6_102123
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2622
SonicParanoid 1 1.000 - - X429
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.850

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