DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6034 and amx-1

DIOPT Version :10

Sequence 1:NP_649005.1 Gene:CG6034 / 39974 FlyBaseID:FBgn0036750 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_497772.2 Gene:amx-1 / 175493 WormBaseID:WBGene00000137 Length:824 Species:Caenorhabditis elegans


Alignment Length:515 Identity:122/515 - (23%)
Similarity:195/515 - (37%) Gaps:118/515 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KIVIIGAGASGVAAATKLLEQGFKNVLLFEAEDRIGGRINTILFANSLIDLGAQWCHGEEGNVVY 82
            ||.|||||.||::.|..|...|. :.:||||:||.|||:.........:..|||...|...|.:.
 Worm   353 KIAIIGAGISGISTARHLKHLGI-DAVLFEAKDRFGGRMMDDQSLGVSVGKGAQIIVGNINNPIT 416

  Fly    83 EKVKDLDVLDRTGDYVVHFIRSNKEILTDVHNKALTELTNAFEVPGEHEGSVGDAF-NAYWKENI 146
            ...:.:.:..|..::....|..|....| :..|.|.:..:.      |..:|.||. |.|..:..
 Worm   417 LLCEQIGIKYRNSNFFCPLIDENGRCFT-LERKELDDQVDL------HYNNVLDAIRNKYQSDRN 474

  Fly   147 HQLVPNDKTIAKEAQDCLKKVICS-MDACD-----------------------------NLSELS 181
            ...||.:.|..:...:...|:... :.|.|                             |||...
 Worm   475 FPDVPLEVTNFRHFTEMFSKMSSGLLSAADLDSLYTPEFEKLLDFHLGNLEFSCGTHVSNLSAKD 539

  Fly   182 Y---RNFRNFA-----IAGGDQNLSWRQKGYWKFLSVLLNSSDNQPGDQGILKGHVHLNKRIAKI 238
            |   ..|.|||     |..|.|.:.       .||:..|:               :.||..:..|
 Worm   540 YDHNEKFGNFAGEHAVITDGAQRII-------DFLATGLD---------------IRLNCPVKCI 582

  Fly   239 NW-EGDGELTLRCWNGQFVSA--DHVICTVSLGVLREKHHKLFVPALPASKIRSIEGLKLGTVNK 300
            :| ..|.::.:...|.:..:.  |.|:.|.||.||:..|.|:|||.||..|.::|:.|..|.:.|
 Worm   583 DWGRDDRKVKIFFENAEQAAEEFDKVVITTSLSVLKSNHSKMFVPPLPIEKQKAIDDLGAGLIEK 647

  Fly   301 FYLEFEEQPVPENIREMAFLWLEEDLKELRSGKYFWLESVC---------YFHRVDCQPR----- 351
            ..::|:.:           .|...|...||: :||...|.|         ::......|.     
 Worm   648 IAVKFDRR-----------FWDTVDADGLRT-EYFGKVSDCKTDRSLFNIFYDFSGKDPNGEDTF 700

  Fly   352 LLQGWIIGAHSRYVETISEEQVLEGIMWMFRKFLKFSVPYPKNFLRSQWQSNPNFRGSYSYY--- 413
            :|..::...|...|..::|.:|.:......||....:|..|...:.|.|.::.....||::.   
 Worm   701 VLMSYVTAEHVNLVNVLTESEVADKFCATLRKMFPSAVINPLGHMMSHWGADRFVGMSYTFVPFG 765

  Fly   414 ----STYADELRTGRTDLASPLVDVTGRPRIQFAGEASSRNHFSTVHGAIESGWREAERL 469
                :|| ::|:..        :|    .::.||||.:......|:.||..||.|||.::
 Worm   766 SDGDATY-NQLKKS--------ID----EKLYFAGEHTIAAEPQTMAGAYISGLREAGQI 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6034NP_649005.1 Amino_oxidase 33..470 CDD:396255 112/500 (22%)
amx-1NP_497772.2 SWIRM 254..337 CDD:461307
Amino_oxidase 361..812 CDD:396255 115/505 (23%)
Blue background indicates that the domain is not in the aligned region.

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