DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7460 and LDL2

DIOPT Version :10

Sequence 1:NP_649004.1 Gene:CG7460 / 39973 FlyBaseID:FBgn0036749 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_187981.1 Gene:LDL2 / 820577 AraportID:AT3G13682 Length:746 Species:Arabidopsis thaliana


Alignment Length:506 Identity:140/506 - (27%)
Similarity:215/506 - (42%) Gaps:107/506 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IVIVGAGSAGIAAATRLLDLGFRNVLLLEAEDRIGGRVHTIPFADN----VVDLGAQWCHGEKGN 78
            :::||||.||:|||.:||..||: ||:||...|.||||:|......    .|:||.....|...|
plant   162 VIVVGAGLAGLAAARQLLSFGFK-VLVLEGRSRPGGRVYTQKMGGKDRFAAVELGGSVITGLHAN 225

  Fly    79 VVYDKVKDLNLLEVTEP-HYETFRCVRSNKE-VLPDDLADQLKTIADMSIPDRQAELLD-FEG-- 138
            .:....:.|::     | |.....|...|.| ||.|.:||.........:.|:..|:.: .||  
plant   226 PLGVLARQLSI-----PLHKVRDNCPLYNSEGVLVDKVADSNVEFGFNKLLDKVTEVREMMEGAA 285

  Fly   139 ---SLGDYINMKYWKELAKLPPIDRTIAEEFLEVFHKFEASVEAADHLFEVSGKGHLEYWLCEGE 200
               |||:.:     :.|..|..:.:...|..|..:|........|..|..:|.    .||     
plant   286 KKISLGEVL-----ETLRVLYGVAKDSEERKLFDWHLANLEYANAGCLSNLSA----AYW----- 336

  Fly   201 LLLNWKDKGYKRFLKLLMKAPEDQSEDLGILKDHV-------RLNRRIAE----INWKGADELTV 254
                                  ||.:...:..||.       ||...:||    |..|..|  |:
plant   337 ----------------------DQDDPYEMGGDHCFLAGGNWRLINALAEGLPIIYGKSVD--TI 377

  Fly   255 RCWNG--EVIT------ADHVICTVSLGVLKEQHPKLFVPALPAAKVRAIEGLKLGTVDKFFLEF 311
            :..:|  |||:      ||.::|||.|||||::..| |.|.||..|..||:.|..|.::|..:.|
plant   378 KYGDGGVEVISGSQIFQADMILCTVPLGVLKKRSIK-FEPELPRRKQAAIDRLGFGLLNKVAMLF 441

  Fly   312 ENPPLPGDWPGFNCLWLKEDLEELRASELFWLESVFGFYPVSRQPRILQGWIIGPHARHMETLTE 376
            .:.....:...|.||    :...:...|.|..   :.::.||..|.:: ..:.|..|:..| .||
plant   442 PSVFWGDELDTFGCL----NESSINRGEFFLF---YAYHTVSGGPALV-ALVAGEAAQRFE-CTE 497

  Fly   377 -----ERVLEGLLWLFRK---FLPFETAHPVRMLRTQWHANPNFRGSYTFRSTYTDALRTGAWDL 433
                 .|||:.|..::..   .:|    .|::.:.|:|.::|...|||:.       :|.|:..:
plant   498 PSVLLHRVLKKLRGIYGPKGVVVP----DPIQTVCTRWGSDPLSYGSYSH-------VRVGSSGV 551

  Fly   434 EAPLQDVCGRPRLQFAGESTHKHFYSTVHGAVETGWREAER-LHL--YYRA 481
            :..:.......||.||||:|.:...:|:|||..:|.|||.: ||:  |.|:
plant   552 DYDILAESVSNRLFFAGEATTRQHPATMHGAYLSGLREASKILHVANYLRS 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7460NP_649004.1 Amino_oxidase 32..476 CDD:396255 127/483 (26%)
LDL2NP_187981.1 PLN02529 1..738 CDD:178144 140/506 (28%)

Return to query results.
Submit another query.