DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7460 and smox

DIOPT Version :9

Sequence 1:NP_001261998.1 Gene:CG7460 / 39973 FlyBaseID:FBgn0036749 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001039135.1 Gene:smox / 733959 XenbaseID:XB-GENE-5840847 Length:534 Species:Xenopus tropicalis


Alignment Length:545 Identity:169/545 - (31%)
Similarity:250/545 - (45%) Gaps:124/545 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RIVIVGAGSAGIAAATRLLDLGFRNVLLLEAEDRIGGRVHTIPFADNVVDLGAQWCHGEKGNVVY 81
            ||||:|||.||::||..||:.||.:|.:|||.|||||||.:|.......:|||.|.||..||.:|
 Frog    26 RIVIIGAGLAGLSAAKTLLEKGFTDVTILEASDRIGGRVQSIKLEHATFELGATWIHGSNGNPIY 90

  Fly    82 DKVKDLNLLEVTE-----------------PHYETFRCVRSNKEVLPD--DLADQLKTIADMSIP 127
            ...:|..|||.|.                 .||.|....|..|:::.:  |:.:::..:......
 Frog    91 HLAEDNGLLEETTDGERSVGRISLYSKNGVAHYLTNSGHRIPKDLVEEFSDVYNEVYNLTQEFFQ 155

  Fly   128 DRQAELLDFEGSLGDYINMKYWKELAKLP-------PIDRTIAEEFLEVFHKFEASVEAADH-LF 184
            :.:....:.:.|:|.:......|.:.:.|       .:...:.::||:|     .|.|::.| :.
 Frog   156 NGKPVNAESQNSVGVFTRDVVRKRIKEDPDDSESTKKLKLAMVQQFLKV-----ESCESSSHSMD 215

  Fly   185 EVSGKGHLEYWLCE-GELLLNWKD---------KGYKRFLKLLMKAPEDQSEDLGILKDHVRLNR 239
            |||        |.| ||    |.:         .|:.|.:::|..:         :.|..::|.:
 Frog   216 EVS--------LSEFGE----WTEIPGAHHVIPCGFIRIVEILSSS---------VPKSLIQLRK 259

  Fly   240 RIAEINW-----KGADELT---------------VRCWNGEVITADHVICTVSLGVLKEQHPKLF 284
            .:..::|     |..|.:.               |.|.:.|.|.|||||.|.||||:|:.|..||
 Frog   260 PVKCVHWNRSIRKQIDRVADHNNDQVEDKGYPVFVECEDYEFIAADHVIVTASLGVMKKFHETLF 324

  Fly   285 VPALPAAKVRAIEGLKLGTVDKFFLEFENPPLPGDWPGFNCLWLKE-DLEELRASELFWLESVFG 348
            .|:||..||.||:.|.:.|.||.|||||.|....:......:|..| :.|.|...|..|.:.:..
 Frog   325 RPSLPEEKVTAIDKLGISTTDKIFLEFEEPFWSPECNSIQFVWEDEAESESLTYPEELWYKKICS 389

  Fly   349 F---YPVSRQPRILQGWIIGPHARHMETLTEERVLEGLLWLFRKF-----LPFETAHPVRMLRTQ 405
            |   ||..|...:|.|||.|..|..||...:|.|.|....|.|||     :|    .|.|::|:.
 Frog   390 FDVLYPPERYGYVLSGWICGEEALIMEKYDDETVAETCTELLRKFTGNPNIP----KPRRIMRSS 450

  Fly   406 WHANPNFRGSYTFRST---------------YTDALRTGAWDLEAPLQDVCGRPRLQFAGESTHK 455
            |.:||.|.|||::...               ||::.:|      ||||       :.|:||:||:
 Frog   451 WGSNPYFFGSYSYTQVGSSGEDVEKLAKPLPYTESSKT------APLQ-------VMFSGEATHR 502

  Fly   456 HFYSTVHGAVETGWREAERLHLYYR 480
            .:|||.|||:.:|.|||:||...|:
 Frog   503 KYYSTTHGALLSGQREADRLAEMYQ 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7460NP_001261998.1 Amino_oxidase 32..476 CDD:279874 156/524 (30%)
NAD_binding_8 33..>74 CDD:290186 20/40 (50%)
smoxNP_001039135.1 PLN02568 23..526 CDD:215308 168/542 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D375579at33208
OrthoFinder 1 1.000 - - FOG0000632
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10742
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X429
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.020

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