DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7460 and KDM1B

DIOPT Version :10

Sequence 1:NP_649004.1 Gene:CG7460 / 39973 FlyBaseID:FBgn0036749 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001426046.1 Gene:KDM1B / 221656 HGNCID:21577 Length:832 Species:Homo sapiens


Alignment Length:526 Identity:138/526 - (26%)
Similarity:215/526 - (40%) Gaps:138/526 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLSKTRQTARIVIVGAGSAGIAAATRLLDLGFRNVLLLEAEDRIGGRV-HTIPFADNVVDLGAQW 71
            ||.|......::|:|||.||:|||.:|.:.|.: |.:|||:||||||| ....|....|..|||.
Human   384 LLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIK-VTVLEAKDRIGGRVWDDKSFKGVTVGRGAQI 447

  Fly    72 CHGEKGNVVYDKVKDLNLLEVTEPHYETFRCVRSNKEVLPDDLADQLKTIADMSIPDRQAELLDF 136
            .:|...|.|....:.|.:    ..|....||          ||..:...|.|.:|..|    :||
Human   448 VNGCINNPVALMCEQLGI----SMHKFGERC----------DLIQEGGRITDPTIDKR----MDF 494

  Fly   137 E-GSLGDYINMKYWKELAKLP--PIDRTIAE-----------EFLEV------FHKFEASVEAAD 181
            . .:|.|.:: ::.|:..:|.  |:...|.|           :|.|:      ||..........
Human   495 HFNALLDVVS-EWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGS 558

  Fly   182 HLFEVSGKG--HLEYW--LCEGELLLNWKDKGYKRFLKLL-------MKAPEDQSEDLGILKDHV 235
            :|.:||.:.  |.|::  ......||.   .||...::.|       :|:|:.|.          
Human   559 NLHQVSARSWDHNEFFAQFAGDHTLLT---PGYSVIIEKLAEGLDIQLKSPQVQC---------- 610

  Fly   236 RLNRRIAEINWKGADELTVRCWNGEVITADHVICTVSLGVLKEQHPKLFVPALPAAKVRAIEGLK 300
                    |::.| ||:.|...:|...:|..|:.||.|.:|::...: |.|.|...|::||..|.
Human   611 --------IDYSG-DEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQ-FNPPLSEKKMKAINSLG 665

  Fly   301 LGTVDKFFLEFENPPLPGDWPGFNCLWLKEDLEELRASELFWLESV-----FGFYPVSRQPR--- 357
            .|.::|..|:|                          ...||...|     ||..|.|...|   
Human   666 AGIIEKIALQF--------------------------PYRFWDSKVQGADFFGHVPPSASKRGLF 704

  Fly   358 -------------ILQGWIIGPHARHMETLTEERVLEGLLWLFRK-FLPFETAHPVRMLRTQWHA 408
                         :|...|.|.....:.||.:::||:..:...|: |...|...|.:...|:|..
Human   705 AVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWST 769

  Fly   409 NPNFRGSYTFRSTYTDALRTG----AWDLEAPLQDVCGRPRLQFAGESTHKHFYSTVHGAVETGW 469
            :|..:.:|:|       ::||    |:|:.|  :|:.|  .:.||||:|::||..||.||..:|.
Human   770 DPWIQMAYSF-------VKTGGSGEAYDIIA--EDIQG--TVFFAGEATNRHFPQTVTGAYLSGV 823

  Fly   470 REAERL 475
            |||.::
Human   824 REASKI 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7460NP_649004.1 Amino_oxidase 32..476 CDD:396255 126/502 (25%)
KDM1BNP_001426046.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47
GLYR1-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS, ECO:0007744|PDB:4GUT, ECO:0007744|PDB:4GUU 282..301
Histone H3-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0000269|PubMed:23266887, ECO:0007744|PDB:4FWF, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS 447..476 7/42 (17%)
Histone H3-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0000269|PubMed:23266887, ECO:0007744|PDB:4FWF, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS 496..507 2/11 (18%)
Histone H3-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0000269|PubMed:23266887, ECO:0007744|PDB:4FWF, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS 547..581 7/33 (21%)
GLYR1-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS, ECO:0007744|PDB:4GUT, ECO:0007744|PDB:4GUU 573..575 0/1 (0%)
GLYR1-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS, ECO:0007744|PDB:4GUT, ECO:0007744|PDB:4GUU 808..824 7/15 (47%)
Blue background indicates that the domain is not in the aligned region.

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