DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7460 and lsd-1

DIOPT Version :9

Sequence 1:NP_001261998.1 Gene:CG7460 / 39973 FlyBaseID:FBgn0036749 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_510000.2 Gene:lsd-1 / 181369 WormBaseID:WBGene00011615 Length:737 Species:Caenorhabditis elegans


Alignment Length:572 Identity:134/572 - (23%)
Similarity:222/572 - (38%) Gaps:156/572 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IVIVGAGSAGIAAATRLLDLGFRNVLLLEAEDRIGGRV--------------------------- 55
            :|::|||:|||||||:||..|| :|.::||....||||                           
 Worm   177 VVVIGAGAAGIAAATQLLTFGF-DVAVVEASGLTGGRVRSLISKHGELIETGCDSLRNLDESVIT 240

  Fly    56 ---HTIPFADNVVDLGAQWCHGEKGNVVYDKVKDLNLLEVTEPH-----YETFRCVRSNKEVLPD 112
               |.:|..:|::         .:..:|:.|.|   .:.|...|     |...:...::....|:
 Worm   241 TLLHQVPLNENIM---------SENTIVFSKGK---YVPVARCHVINGLYANLKAGLAHASHGPE 293

  Fly   113 DLADQLKTIADMSIPDRQA-----------ELLDFEGSLGDYINM----KYWKELAKLPPIDRTI 162
            ...:.     .:.|..:||           .||.:.....:.:|:    |:..|:.|...:...:
 Worm   294 QRGEN-----GLYISRQQAYENYFNMIERSTLLSYYNFAKEKVNLNAERKHLYEVLKTNRLTALL 353

  Fly   163 AEEFLE--------VFHKFEASVEAADHLFEVSGKGHLEYWLCEGEL------------------ 201
            ||:.|:        :....:..:|.|...|:.:.:   .:.:||..:                  
 Worm   354 AEQKLKNTPPSDELLLKSLQIDIEKAIRQFDEACE---RFEICEERIADLEKNPRCKQSMHPNDF 415

  Fly   202 -----LLNWKDKGY------KRF------LKLLMKAPEDQSEDLGIL-------KDHVRLNRRIA 242
                 ||.::::.:      .:|      |||..:....|.....:|       |..:..|:|:.
 Worm   416 IHYNFLLGFEERLFGAQLEKVQFSCNVNELKLKSQVARVQEGLAQVLINVANERKVKIHHNQRVI 480

  Fly   243 EINWKGADE--LTVRCWNGEV--ITADHVICTVSLGVLK-----EQHPKLFVPALPAAKVRAIEG 298
            ||:...:|.  |.:|..:|.|  :.||:|:.|:.:||||     ::...:|.|.||.:|..||..
 Worm   481 EIDTGSSDAVILKLRKPDGSVGILNADYVVSTLPIGVLKKTIIGDERAPVFRPPLPKSKFAAIRS 545

  Fly   299 LKLGTVDKFFLEFENPPLPGDWP-GFNCLWLKEDLEELRASELFWLESVFGFYPVSRQP--RILQ 360
            |..|.::|....||.    ..|| ..|...:..|....||:...|          |..|  |.|.
 Worm   546 LGNGLINKIVFVFET----RFWPESINQFAIVPDKISERAAMFTW----------SSLPESRTLT 596

  Fly   361 GWIIGPHARHMETLTE--ERVLEGLLWLFRKFLPFETAHPVRMLRTQWHANPNFRGSYTFRSTYT 423
            ...:|.:..|...:||  .:.||.|..:|:     :...|:....|.||.:....|:.||.|..|
 Worm   597 THYVGENRFHDTPVTELITKALEMLKTVFK-----DCPSPIDAYVTNWHTDELAFGTGTFMSLRT 656

  Fly   424 DALRTGAWDLEAPLQDVCGRPRLQFAGESTHKHFYSTVHGAVETGWREAERL 475
            :.....|  |:.||:...|:||:.||||.|....:.|:.||..:|.|.|..|
 Worm   657 EPQHFDA--LKEPLKTRDGKPRVFFAGEHTSALEHGTLDGAFNSGLRAAADL 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7460NP_001261998.1 Amino_oxidase 32..476 CDD:279874 124/558 (22%)
NAD_binding_8 33..>74 CDD:290186 14/70 (20%)
lsd-1NP_510000.2 SWIRM 80..158 CDD:367940
Amino_oxidase 191..706 CDD:366721 123/556 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161009
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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