DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccn and si:ch211-106h11.3

DIOPT Version :10

Sequence 1:NP_730294.1 Gene:Ccn / 39972 FlyBaseID:FBgn0052183 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_073800018.1 Gene:si:ch211-106h11.3 / 497580 ZFINID:ZDB-GENE-050208-296 Length:381 Species:Danio rerio


Alignment Length:331 Identity:82/331 - (24%)
Similarity:114/331 - (34%) Gaps:118/331 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NCSVGNTTFAHGVTFKLDCKTQCVCENGRHACSTLCPNEQLPAPEDTISCRSPRLVEVPGHCCKM 104
            :|......:.:|..|:..||.||.|.:|...|..|||.:   .|..:.||..||||::||.||..
Zfish    97 SCEYNGRMYQNGENFRAGCKHQCTCIDGAVGCVPLCPTD---IPLSSPSCPKPRLVKIPGQCCLS 158

  Fly   105 WLCEN----------------------------PTADVYA------------------------- 116
            ..|..                            |....|:                         
Zfish   159 LDCHGESPVLPPVFRRPQPPPFLLPDPHTFKKPPAKPKYSLSNELMEVEKRWDKPRSRKHLPAWK 223

  Fly   117 ----TCHNSTTSGNWTACSRSCGLGTATRHTTTHAGCHQLSNLRLCENRRCDKDDHEDNKWSRSR 177
                .|...|||  ||:||||||:|.::|.|..:..|..:...|||..|.|.         |.:.
Zfish   224 QAGRQCVAQTTS--WTSCSRSCGMGVSSRVTNENRQCKLMKETRLCNIRPCS---------SAAV 277

  Fly   178 PLTHKRKQHRAHSHSHQRYHHHKEHEEPAHRIRKGHECRSIQRL-GPARIRLGECVSRKLYRPKL 241
            |                              |:||.:|...|:. .|.|:|...|.|.:||||..
Zfish   278 P------------------------------IKKGRKCSRTQKSPEPLRLRYAGCRSTRLYRPNY 312

  Fly   242 CGRCHRGVKCCAPAVSTTIQVELLCPLNA--VDPINYVQRRQANKKRQMKEPQDDEDDDDDDDGD 304
            ||.|..| :||:|..:.|:.|...||...  ...:.:||..:.|             ||.....|
Zfish   313 CGMCLDG-RCCSPRRTRTVPVLFSCPTGERFERAVMFVQSCKCN-------------DDCGSLND 363

  Fly   305 DNVEPE 310
            .::.|:
Zfish   364 ASLPPQ 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CcnNP_730294.1 VWC 41..104 CDD:450195 24/62 (39%)
TSP1_spondin 118..163 CDD:480609 20/44 (45%)
si:ch211-106h11.3XP_073800018.1 None

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