DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccn and Ccn6

DIOPT Version :10

Sequence 1:NP_730294.1 Gene:Ccn / 39972 FlyBaseID:FBgn0052183 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001120848.1 Gene:Ccn6 / 327743 MGIID:2685581 Length:354 Species:Mus musculus


Alignment Length:244 Identity:57/244 - (23%)
Similarity:87/244 - (35%) Gaps:62/244 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 CSVGNTTFAHGVTFKLDCKTQCVCENGRHACSTLCPNEQLP--APEDTISCRSPRLVEVPGHCCK 103
            |......:.:|..|:......|:|.:|...|:.|.    :|  |..:..:.:..|..: |.:|.:
Mouse   122 CEFNRVYYQNGQVFQPHPLFSCLCVSGAIGCTPLF----IPKLAGSNCSAAKGRRKTD-PPNCGR 181

  Fly   104 MWLCENPTADVYAT--------------CHNSTTSGNWTACSRSCGLGTATRHTTTHAGCHQLSN 154
            ..|.:..:|. |.|              |....|  .||.|||:||:|.:.|.|..:|.|.....
Mouse   182 GTLQQQNSAS-YKTMSAYRNLPLTWRKKCLVQAT--KWTPCSRTCGMGISNRVTNDNANCEMRKE 243

  Fly   155 LRLCENRRCDKDDHEDNKWSRSRPLTHKRKQHRAHSHSHQRYHHHKEHEEPAHRIRKGHECRSIQ 219
            .|||..:.|.::..:                                    |.:|.:|..|:...
Mouse   244 RRLCYIQPCSRNTSQ------------------------------------AVKIPRGETCQPTF 272

  Fly   220 RLGPA-RIRLGECVSRKLYRPKLCGRCHRGVKCCAPAVSTTIQVELLCP 267
            :|..| :.....|.|.:.|||..||.| ...:||.|..|..|.|...||
Mouse   273 QLPKAEKFVFSGCSSTQSYRPTFCGIC-LDKRCCVPNKSKMITVRFDCP 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CcnNP_730294.1 VWC 41..104 CDD:450195 13/64 (20%)
TSP1_spondin 118..163 CDD:480609 17/44 (39%)
Ccn6NP_001120848.1 IGFBP 48..100 CDD:459717
TSP1_CCN 209..252 CDD:465952 17/44 (39%)
GHB_like 275..341 CDD:473907 17/47 (36%)
Blue background indicates that the domain is not in the aligned region.

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