DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccn and ccn2a

DIOPT Version :10

Sequence 1:NP_730294.1 Gene:Ccn / 39972 FlyBaseID:FBgn0052183 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001015041.1 Gene:ccn2a / 321449 ZFINID:ZDB-GENE-030131-102 Length:345 Species:Danio rerio


Alignment Length:253 Identity:75/253 - (29%)
Similarity:107/253 - (42%) Gaps:69/253 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ANCSVGNTTFAHGVTFKLDCKTQCVCENGRHACSTLCPNE-QLPAPEDTISCRSPRLVEVPGHCC 102
            |.|..|...:..|.:|:..||.||.|.:|...|..||..: :||:|:    |..||.|:|||.||
Zfish    97 ATCVFGGMVYRSGESFQSSCKYQCTCLDGAVGCVPLCGMDIRLPSPD----CPMPRRVKVPGKCC 157

  Fly   103 KMWLCENPTADVYA----------------------TCHNSTTSGNWTACSRSCGLGTATRHTTT 145
            :.|:|::|..:.:.                      .|...||  .|:|||::||||.:||.|..
Zfish   158 EEWVCDSPRQNTFVGSALAAYREEETYGPDPSMMRENCLVQTT--EWSACSKTCGLGISTRVTND 220

  Fly   146 HAGCHQLSNLRLCENRRCDKDDHEDNKWSRSRPLTHKRKQHRAHSHSHQRYHHHKEHEEPAHRIR 210
            :..|......|||..|.|:                         ||..:             :||
Zfish   221 NRECRLEKQSRLCMVRPCE-------------------------SHLEE-------------KIR 247

  Fly   211 KGHECRSIQRLG-PARIRLGECVSRKLYRPKLCGRCHRGVKCCAPAVSTTIQVELLCP 267
            ||.:|....|:. |.:..:..|.:.|.||||.||.|..| :||.|..:.|:.:|..||
Zfish   248 KGKKCIRTPRVSKPMKFEISGCTTTKSYRPKFCGVCTDG-RCCTPHRTATLPMEFKCP 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CcnNP_730294.1 VWC 41..104 CDD:450195 25/63 (40%)
TSP1_spondin 118..163 CDD:480609 19/44 (43%)
ccn2aNP_001015041.1 IGFBP 26..78 CDD:459717
VWC 99..158 CDD:214564 24/62 (39%)
TSP1_CCN 195..238 CDD:465952 19/44 (43%)
GHB_like 249..340 CDD:473907 21/57 (37%)
Blue background indicates that the domain is not in the aligned region.

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