DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccn and Ccn3

DIOPT Version :10

Sequence 1:NP_730294.1 Gene:Ccn / 39972 FlyBaseID:FBgn0052183 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_035060.1 Gene:Ccn3 / 18133 MGIID:109185 Length:354 Species:Mus musculus


Alignment Length:258 Identity:73/258 - (28%)
Similarity:104/258 - (40%) Gaps:71/258 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PNPANCSVGNTTFAHGVTFKLDCKTQCVCENGRHACSTLCP-NEQLPAPEDTISCRSPRLVEVPG 99
            |...||......:.:|..|:.:|:..|.|.:|:..|...|. :..||.|:    |.:||.|.|||
Mouse    99 PEGDNCVFDGVIYRNGEKFEPNCQYFCTCRDGQIGCLPRCQLDVLLPGPD----CPAPRKVAVPG 159

  Fly   100 HCCKMWLC---ENPT----------------------ADVYATCHNSTTSGNWTACSRSCGLGTA 139
            .||:.|.|   |..|                      :|....|...||  .|:|||:|||:|.:
Mouse   160 ECCEKWTCGSDEQGTQGTLGGLALPAYRPEATVGVEVSDSSINCIEQTT--EWSACSKSCGMGVS 222

  Fly   140 TRHTTTHAGCHQLSNLRLCENRRCDKDDHEDNKWSRSRPLTHKRKQHRAHSHSHQRYHHHKEHEE 204
            ||.|..:..|..:...|||..|.|:::..|         :|.|                      
Mouse   223 TRVTNRNRQCEMVKQTRLCIVRPCEQEPEE---------VTDK---------------------- 256

  Fly   205 PAHRIRKGHEC-RSIQRLGPARIRLGECVSRKLYRPKLCGRCHRGVKCCAPAVSTTIQVELLC 266
                  ||.:| |:.:.|....::...|.|...|:|:.||.|..| :||.|..:.|||||..|
Mouse   257 ------KGKKCLRTKKSLKAIHLQFENCTSLYTYKPRFCGVCSDG-RCCTPHNTKTIQVEFQC 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CcnNP_730294.1 VWC 41..104 CDD:450195 21/63 (33%)
TSP1_spondin 118..163 CDD:480609 19/44 (43%)
Ccn3NP_035060.1 IB 28..>89 CDD:197525
VWC 104..164 CDD:214564 21/63 (33%)
TSP1_CCN 203..246 CDD:465952 19/44 (43%)
CT 266..335 CDD:214482 18/48 (38%)
Blue background indicates that the domain is not in the aligned region.

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