DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccn and ccn3

DIOPT Version :10

Sequence 1:NP_730294.1 Gene:Ccn / 39972 FlyBaseID:FBgn0052183 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_002938019.1 Gene:ccn3 / 100494006 XenbaseID:XB-GENE-1013046 Length:344 Species:Xenopus tropicalis


Alignment Length:277 Identity:78/277 - (28%)
Similarity:111/277 - (40%) Gaps:87/277 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NCSVGNTTFAHGVTFKLDCKTQCVCENGRHACSTLCPNE-QLPAPEDTISCRSPRLVEVPGHCCK 103
            ||......:.:..||:..||..|.|.||...|...|..: .||.|:    |..||.|:|||.||:
 Frog    94 NCIFDGVVYRNRATFQPSCKYHCTCLNGHIGCVPRCNLDLMLPGPD----CPFPRRVKVPGECCE 154

  Fly   104 MWLCEN---------------PTA-------DVYATCHNSTTSGNWTACSRSCGLGTATRHTTTH 146
            .|:|::               |.|       |:: ||...||  .|:|||::||:|.::|.|..:
 Frog   155 KWVCDSKEEMAIGGFAMAAYRPEATLGIDASDMF-TCIAQTT--EWSACSKTCGMGVSSRVTNRN 216

  Fly   147 AGCHQLSNLRLCENRRCDKDDHEDNKWSRSRPLTHKRKQHRAHSHSHQRYHHHKEHEEPA-HRIR 210
            ..|.....:|||..|.|:                                      |||. |..:
 Frog   217 PRCEMQKQIRLCMVRPCE--------------------------------------EEPGWHMEK 243

  Fly   211 KGHEC-RSIQRLGPARIRLGECVSRKLYRPKLCGRCHRGVKCCAPAVSTTIQVELLCPLNAVDPI 274
            ||..| |..:...|..:....|.|.:.|:||.||:|..| :||.|..:.|:.||..||       
 Frog   244 KGKRCVRMRKTTKPIHLHYKNCSSVQPYKPKFCGQCSDG-RCCTPHTTKTMHVEFECP------- 300

  Fly   275 NYVQRRQANKKRQMKEP 291
                     :||.:|:|
 Frog   301 ---------QKRIIKKP 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CcnNP_730294.1 VWC 41..104 CDD:450195 23/63 (37%)
TSP1_spondin 118..163 CDD:480609 17/44 (39%)
ccn3XP_002938019.1 IGFBP 21..74 CDD:459717
VWC 95..155 CDD:214564 23/63 (37%)
TSP1_CCN 190..233 CDD:465952 17/44 (39%)
CT 253..322 CDD:214482 22/73 (30%)
Blue background indicates that the domain is not in the aligned region.

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