DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6052 and PDR10

DIOPT Version :9

Sequence 1:NP_649002.3 Gene:CG6052 / 39971 FlyBaseID:FBgn0036747 Length:1725 Species:Drosophila melanogaster
Sequence 2:NP_014973.1 Gene:PDR10 / 854506 SGDID:S000005855 Length:1564 Species:Saccharomyces cerevisiae


Alignment Length:1302 Identity:250/1302 - (19%)
Similarity:436/1302 - (33%) Gaps:478/1302 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   444 GITWRNMFHPVSTDDSLTLFYIIMTMSFGSIMFISICLYVEQVFPGEYGVPRRWNFMCHKNYWRQ 508
            |..|:::   .::.||..:.|   ..:||::             |.:| :...|..:..:.:.| 
Yeast   138 GCAWKDL---SASGDSADITY---QGTFGNM-------------PIKY-LKMSWRCISRRLFHR- 181

  Fly   509 YVPSLNIVPSFQTILHGSAKAKSCRRAREVGIQLFNLQKNYGKLKAVKGISLKMHRNEITVLLGH 573
                          .||.::      ..:.|.|:         ||.:.|.   ::..|:.|:||.
Yeast   182 --------------THGKSE------DNDSGFQI---------LKPMDGC---INPGELLVVLGR 214

  Fly   574 NGAGKTT---TINMITGIVKPTSGTAIV-NGY---DIRTHLAKARESLGICPQNNILFKEMSVRD 631
            .|||.||   :|::.|...|.:..|.|. ||:   :|:.|.   |..:....:::|....::|..
Yeast   215 PGAGCTTLLKSISVNTHGFKISPDTIITYNGFSNKEIKNHY---RGEVVYNAESDIHIPHLTVFQ 276

  Fly   632 HIIFFSKLKGIRG-TKAVENEV-GKYMTMLKL--QDKSYVA--------AKNLSGGMKRKLSLC- 683
            .:...::||..|. .|.|:.:. .|:||.:.:  ...|:.|        .:.:|||.::::|:. 
Yeast   277 TLYTVARLKTPRNRIKGVDRDTFAKHMTEVAMATYGLSHTADTKVGNDFVRGVSGGERKRVSIAE 341

  Fly   684 CALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQSE----KDGRTILLTTHYMDEADVLGDRIAILS 744
            .::|| :|....|..:.|:|:|........|:::    |...|:.:.....|..| |.|::.:|.
Yeast   342 VSICG-SKFQCWDNATRGLDSATALEFIKALKTQATITKSAATVAIYQCSKDAYD-LFDKVCVLY 404

  Fly   745 EGKLQCQGTSFYLKKRF-GTGYLLVCIMQSGCDVGAVTQLIRKYVPPIKPERVLGTELTYRLPTE 808
            :|.....|.|...||.| ..||  ||                       |||....:....:.:.
Yeast   405 DGYQIFFGPSKQAKKYFQRMGY--VC-----------------------PERQTTADYLTSITSP 444

  Fly   809 YSKKFAELLQDLD----------------------EKCAQLQLVGYGLSGATLEDVFMAVNTDKR 851
                 :|.::|.|                      |:..|||:           .|...::||..
Yeast   445 -----SERIKDKDMVKHGIMIPQTAYEMNQYWIQSEEYKQLQV-----------QVNKHLDTDSS 493

  Fly   852 VQGGAEGPPVDGSIDFKELVFDSK-TREKRRIRRCFMFWQALFLKKFYTTTRNYWLL----GIQL 911
            .|              :|.:.::. .::.:|.|....:..:.||:..|...|:.|.:    .|||
Yeast   494 QQ--------------REQIKNAHIAKQSKRARPSSPYTVSFFLQVKYILIRDIWRIKNDPSIQL 544

  Fly   912 --VLPIAVMALTILNSRGGRIYYELPAMPISINQYSSAYVVLEDNTTDKTSSLADAYSKHLEHYA 974
              ||..|.|||.:     |.::||:.....:...|.....:......:..|||.:.:|.:     
Yeast   545 FTVLSHAAMALIL-----GSMFYEVMLSTTTTTFYYRGAAIFFAILFNAFSSLLEIFSLY----- 599

  Fly   975 RRCTLLRTGDLKFEDYILSHDVNHSRRIDFHFLAGLTVSENNFIVWLNNKPLHTAPLTLNLLHNA 1039
                                                                .|.|:|..  |..
Yeast   600 ----------------------------------------------------ETRPITEK--HKT 610

  Fly  1040 LAIKLLGQD--ASTYVTNEPLPYSDDTRTLRLNKGQVLGAEISINLSLTMCFITAFYAIPIIRER 1102
            .::.....|  |||:                        :::...|:..:.|...:|.: |..:|
Yeast   611 YSLYRPSADAFASTF------------------------SDVPTKLATAVTFNIPYYFL-INLKR 650

  Fly  1103 ETRAKLLQFLSGVDVCAYWTSHIVWDYLVFVLSALSSILTIAAFKEIGYIT---PLDLSRYFYML 1164
            :..|....||..:             ..||.:|.|        |:.||.::   |..:.....:|
Yeast   651 DAGAFFFYFLINI-------------ITVFAMSHL--------FRCIGSVSKTLPQAMVPASVLL 694

  Fly  1165 LIF----GF--PGIMLSYAASGCFSDAATGFTR-ISIINTLMGTGLFLMFMTLNFEAFQLKDVAE 1222
            |.|    ||  |.:.:            .|::: ||.||.|.     .:|.:|....|..::.  
Yeast   695 LAFAMYTGFAIPRVQM------------LGWSKWISYINPLS-----YLFESLMINEFHGRNF-- 740

  Fly  1223 KLAWYFRLSPHYSLASSTHSIHIGYNIRRGCSIGGIRKLPKQLRCRNVPICCDIPG--------- 1278
            ..|.|....|:|..|:.....         ||..|                 .|||         
Yeast   741 PCAQYIPSGPNYVNATGDEVT---------CSALG-----------------SIPGNNYVSGDDF 779

  Fly  1279 ---YYG------WRKPGV-LVEITYMIMLGSTLF-------------LLIVMHDA----KVCNLI 1316
               .||      ||..|: |..|.:.:.|  .||             :|:..|..    |...::
Yeast   780 IQTNYGYRHKNKWRSVGIGLAYIIFFLFL--YLFFCEYNEGAKQNGEMLVFPHSVVKKMKKKGIV 842

  Fly  1317 AEKLGNCFSKRKR--------VEGGTSIENDSVVAEQRVVRE----------------------- 1350
            :||      |:|.        .|....:.|:|...:.|.:|:                       
Yeast   843 SEK------KKKNQPTLSTSDAEKDVEMNNNSSATDSRFLRDSDAAIMGNDKTVAKEHYSSPSSS 901

  Fly  1351 --MINSGRK--DVPL-----------LVYKISKRYRSKLAVKAISFHVPHAECFGLLGINGAGKT 1400
              ..||..|  |:.|           |.|.|..:...:..:..:...|.......|:|.:|||||
Yeast   902 ASQSNSFSKSDDIELSKSQAIFHWKNLCYDIPIKNGKRRILDNVDGWVKPGTLTALIGASGAGKT 966

  Fly  1401 STFKMLAGDEKIT----SGEAYIDGTNISTHKVYRKIGYCPQFDALFEDLTGRETLNIYCLLR-- 1459
            :....||  |:.|    :|:.::|| ........|.||||.|.|...:..|.||:|.....||  
Yeast   967 TLLDCLA--ERTTMGLITGDVFVDG-RPRDQSFPRSIGYCQQQDLHLKTATVRESLRFSAYLRQA 1028

  Fly  1460 ---GVQRRHVTPICWGLAISFGFAKHMDK-----QTKHYSGG------------NRRKLSTAISV 1504
               .::.:.               |::::     :.|.|:..            .|::|:..:.:
Yeast  1029 DDVSIEEKD---------------KYVEEVIEVLEMKLYADAIVGVPGEGLNVEQRKRLTIGVEL 1078

  Fly  1505 LGNPSVL-YLDEPTSGMDPAARRQLWQIIGLIRTAGKSIVLTSHS-----MDECEALCSRLAIMV 1563
            ...|.:| :|||||||:|........|::..:.:.|::|:.|.|.     |.|.:    ||..:.
Yeast  1079 AAKPKLLVFLDEPTSGLDSQTAWSTCQLMKKLASRGQAILCTIHQPSALLMQEFD----RLLFLQ 1139

  Fly  1564 DG 1565
            :|
Yeast  1140 EG 1141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6052NP_649002.3 rim_protein 21..>54 CDD:130324
rim_protein <149..1709 CDD:130324 250/1302 (19%)
PDR10NP_014973.1 3a01205 110..1556 CDD:273362 250/1302 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 105 1.000 Inparanoid score I1418
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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