DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6052 and ABCA9

DIOPT Version :9

Sequence 1:NP_649002.3 Gene:CG6052 / 39971 FlyBaseID:FBgn0036747 Length:1725 Species:Drosophila melanogaster
Sequence 2:NP_001330984.1 Gene:ABCA9 / 836295 AraportID:AT5G61730 Length:950 Species:Arabidopsis thaliana


Alignment Length:950 Identity:242/950 - (25%)
Similarity:409/950 - (43%) Gaps:207/950 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LMWKNWILQWNQKMQIVFALVLPVLFLCLILVLRIIVLPEKMDEIRYPTVSISDLNLYMRMVPLG 89
            |..||.:|.|..|......|.....|:.||..:........:...|:..|:.....:.:.::|..
plant    17 LFKKNLLLSWRNKRATCLHLFSSFFFILLIFSIEESSKASDLTSTRHKNVTDPKALVSLPILPCE 81

  Fly    90 NRILHENGSLNIPRNFLCYTPNNPINSAIVGATAIRLRLLGTRAYDTALHMEQDMVLHNFLAGVQ 154
            ::..                              :||     ..:|......|...:.:.::.:.
plant    82 DKFF------------------------------VRL-----PCFDFVWSGNQSRRVTDIVSAIM 111

  Fly   155 FEDNENVNTNDAGYPLNLN--YSLRFPSELRTMQGPIIDTWRTSRLFLSY--DTSGSRNRLDNDG 215
                    .|:.|.|:..|  .|...|.|        :|.|     |:|:  ..:|:.:.::.:.
plant   112 --------ANNPGRPIPTNKVQSFTKPEE--------VDAW-----FMSHPSQVTGALHFVEKNA 155

  Fly   216 GVPVGY-------------IREG-----FLPIQHAL------------TMSWLALASGVTDTGIP 250
            .| :.|             .||.     .:|:|.|.            ..||        |.|  
plant   156 TV-ISYGIQTNSSSEKKRGRREDPTFKFLVPLQIAAEREIARSLIGDPKFSW--------DFG-- 209

  Fly   251 AIHLQRFPYRAYTYDQLLSGLRQLLPFVILLSFIYPASTVTKYVTSEKELQLKEIMKLIGVHN-- 313
               .:.|...|...:.::|....:.|...|...::........|.:||||:|:|.|..:||:.  
plant   210 ---FKEFARPAIGGEVIISAFYLMGPVFFLAFSMFGFVLQLGSVVTEKELKLREAMTTMGVYESA 271

  Fly   314 -WLHWVAW-----FVKSYIMLMLVVFLIMSLIMVKFYASVAVLTFSSWVPVLLFLHTYVVTSVCL 372
             ||.|:.|     ||.|   |.||:|.:|  ...:|:..      :|:|.|.|....:....:.|
plant   272 YWLSWLIWEGILTFVSS---LFLVLFGMM--FQFEFFLK------NSFVLVFLLFFLFQFNMIGL 325

  Fly   373 CFMLAVLFSKASTASAVAAIFW---FLTYIPYSFGYYYYERLSLMSKLLISLIFSNSALGFGIHV 434
            .|.|:.:.||:|:|:.|..:.:   |:|.|..:.|:.|....|:.|:::.|| |..:....|:.:
plant   326 AFALSSIISKSSSATTVGFLVFLVGFITQIVTTAGFPYSSAYSIGSRVIWSL-FPPNTFSAGLQL 389

  Fly   435 IVMWEGTG----EGITWRNMFHPVSTDDSLTL----FYIIMTMSFGSIMFISICLYVEQVFPGEY 491
            ::  |.|.    .||:|.........:.:..:    .||.:..:|  ..:..:.||.:.:.|...
plant   390 LL--EATSSPGDSGISWSERAICAGGESTCVITTNKIYIWLVGTF--FFWFVLALYFDNIIPNAS 450

  Fly   492 GVPRRWNFMCHKNYWR-----------------QYVPSLNIVPSFQTILHG----SAKAKSCRRA 535
            ||.:...:....:||.                 ...|..:|.|..:.:|..    ..:|...|..
plant   451 GVRKSIFYFLKPSYWTGKEGNKVEEGSICSCIGSVPPVEHITPEDEDVLEEEILVKQQAMDGRVD 515

  Fly   536 REVGIQLFNLQKNY-GKLK-------------AVKGISLKMHRNEITVLLGHNGAGKTTTINMIT 586
            ..:.:|:..|.|.| |..|             ||||:.:.:.::::..|||.|||||||||:.:|
plant   516 PNIAVQIHGLAKTYPGTTKLGCCKCTKTSPFHAVKGLWMNIAKDQLFCLLGPNGAGKTTTISCLT 580

  Fly   587 GIVKPTSGTAIVNGYDIRTH--LAKARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVE 649
            ||...|.|.|.:.|..||:.  ::..|:.:|:|||.:||:..:|..:|:..|:.:||: ...:::
plant   581 GINPVTGGDAKIYGNSIRSSVGMSNIRKMIGVCPQFDILWDALSSEEHLHLFASIKGL-PPSSIK 644

  Fly   650 NEVGKYMTMLKLQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWDLL 714
            :...|.:..:||...:.:.|.:.||||||:||:..||.|:.|:|..|||::|:|...||.:||::
plant   645 SIAEKLLVDVKLTGSAKIRAGSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWDII 709

  Fly   715 QSEKDGRTILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGTGYL-LVCIMQSGCDVG 778
            |..|.||.|:||||.|:|||:|.|||.|:::|:|:|.|||..||.|||||:: .|..:::..| |
plant   710 QESKKGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVATVSFIENKKD-G 773

  Fly   779 AVTQLIRKYVPPIKPERVLGTELTYRLPTEYSKKF---------AELLQ----DLDEKCAQLQLV 830
            |...|.|.:...:|.|           |||.:|.|         .:||:    :|.::.::..:.
plant   774 APEPLKRFFKERLKVE-----------PTEENKAFMTFVIPHDKEQLLKGFFAELQDRESEFGIA 827

  Fly   831 GYGLSGATLEDVFMAVNTDKRVQGGAEGPPVDGSIDFKEL 870
            ...|..||||:||:  |..:|.:  .|...|:|::...||
plant   828 DIQLGLATLEEVFL--NIARRAE--LESATVEGTMVTLEL 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6052NP_649002.3 rim_protein 21..>54 CDD:130324 8/28 (29%)
rim_protein <149..1709 CDD:130324 224/825 (27%)
ABCA9NP_001330984.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I2373
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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