Protein Alignment CG6052 and ABCA6

DIOPT Version :10

• Sequence 1: NP_649002.3
• Gene: CG6052 / 39971
• FlyBaseID: FBgn0036747
• Length: 1725
• Species: Drosophila melanogaster
• Sequence 2: NP_001327229.1
• Gene: ABCA6 / 823931
• AraportID: AT3G47770
• Length: 926
• Species: Arabidopsis thaliana
• Alignment Length: 987
• Identity: 246/987 - (24%)
• Similarity: 415/987 - (42%)
• Gaps: 246/987 - (24%)

  Fly    25 LMWKNWILQ----WNQKMQIVFALVLPVLFLCLILVLRIIVLPEKMD------------------ 67
            |..||...|    |:....||..|.|.|:.:|:..|...:| ...:|
plant    16 LFKKNLTYQKRNIWSNVRLIVIPLYLCVVLVCIQAVFDSLV-NNSVDNQCGCRCADDDKNGDGKC 79

  Fly    68 EIRYPTVSISDLNLYM--------RMVPLGNRILHENGSLNIPRNFLCYTPNNPINSAIVG---- 120
            ||:...:..|..|..:        .::||    ||...|:|  |:....|.:.|:...:.|
plant    80 EIKSCGLQYSSQNQAVFCAFPNPPPLLPL----LHIPPSVN--RDSCQRTGSCPVTILVTGNNQS 138

  Fly   121 -ATAIRLRLLGTRAYDTALHMEQDMVLHNFLAGVQFEDNENVNTN--DAGY-------------- 168
             .|.:...||.|   ...::...|:.|.|....|....:|...||  |.|.
plant   139 LGTTLSENLLST---SFTVNSSSDLFLRNLAYNVLSTTSETDYTNYRDPGIYSDLPIFNIQPQCT 200

  Fly   169 P---LNLNY---SLRFPSELRTMQGPIIDTWRTSRLFLSYDTSGSRNRLDNDGGVPVGYIREGFL 227
            |   |:|::   .|.|..|:|.:||  ::.||.:.|.:            ||      .|.:||.
plant   201 PATILSLSFRQPPLEFHKEVRCVQG--LNLWRNNSLEV------------ND------EIFKGFR 245

  Fly   228 PIQHALTMSWLALASGVTDTGIPAIHLQRFPYRAY-----------------------TYDQLLS 269
            ...|...::.:|.|..:.:|.....::..:.|..|                       .|.|.|.
plant   246 KENHEEIINEVAAAYDLLNTDRNKFNVTIWYYTTYKGDLQDWRVKYVRVPRSVNMVSNAYLQFLR 310

  Fly   270 G-------------------LRQ---------------LLPF-VILLSFIYPASTVTKYVTSEKE 299
            |                   ||.               ||.| |||.|.:|           ||:
plant   311 GPGTKILFDFVKEMPKQETRLRMDMASLIGPIFFTWVILLLFPVILTSLVY-----------EKQ 364

  Fly   300 LQLKEIMKLIGVHNWLHWV---AWFVKSYIMLMLVVFLIMSLIMVKFYASVAVLTFSSWVPVLLF 361
            .:|:.|||:.|:.:..:|:   |:|:....:.::.:.:..|.|.:||:      .|:.:....:|
plant   365 QRLRIIMKMHGLGDAPYWMISYAYFLAISTLYIVCLMIFGSAIGLKFF------RFNDYTIQFMF 423

  Fly   362 LHTYVVTSVCLCFMLAVLFSKASTASAVAAIFWFLTYIPYSFGY-YYYERLSLMSK-LLISLIFS 424
            ...|:...:.:.|:::..||||.|||.||.|:.|.:.:..:|.: :..|.||...: :.:..::.
plant   424 YFLYINLQISIAFLVSSAFSKAVTASVVAYIYVFGSGLLGAFLFQFLIESLSFPRRWIFVMELYP 488

  Fly   425 NSALGFGIHVIVMWE-----GTGEGITWRNMFHPVSTDDSLTLFYIIMTMSFGSIMFISICLYVE 484
            ..:|..|::....:.     ...:|:.|:: |...:.|:..|:..:..      ::.:....|::
plant   489 GFSLYRGLYEFSQYAFQRNLNGRDGMKWKD-FRGSAMDEVFTIIIVEW------VVALVATYYID 546

  Fly   485 QVFPGEYG-------------VPRRWNFMCHKNYWRQYVPSLNIVPSFQTILHGSAKAKSCRRAR 536
            :|......             .|:..:|...::.....:..|:::...:|:     |.....|::
plant   547 RVSSSSKDTFAFLKNPFKLSPTPQMLSFQKERSDVSVEMEKLDVIQEKETV-----KQLIFERSK 606

  Fly   537 EVGIQLFNLQKNY-------GKLKAVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSG 594
            ..||...||:|.|       .|| ||.|:||.:...|...:||.||||||:.|||:||:|||:||
plant   607 NHGIVCDNLKKVYQGRDGNPPKL-AVCGLSLAVPSGECFGMLGPNGAGKTSFINMMTGLVKPSSG 670

  Fly   595 TAIVNGYDIRTHLAKARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRG---TKAVENEV---- 652
            :|.|.|.||...:.|...|:|:|||:::|::.::.::|::|:.:||.::|   .:|||..:
plant   671 SAFVQGLDICKDMDKVYISMGVCPQHDLLWETLTGKEHLLFYGRLKNLKGHDLNQAVEESLKSVN 735

  Fly   653 -----------GKYMTMLKLQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAG 706
                       |||                 ||||||:||:..:|.|:.|||..||||:|:|.|.
plant   736 LFHGGVADIPAGKY-----------------SGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPAS 783

  Fly   707 RRSLWDLLQSEKDGRTILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGTGYLLVCIM 771
            |.:||.:::..|....|:||||.|:||:.|.||:.|..:|:|||.|....||.|:|..|:|....
plant   784 RINLWTVIKRAKKHAAIILTTHSMEEAEFLCDRLGIFVDGRLQCIGNPKELKGRYGGSYVLTITT 848

  Fly   772 --QSGCDVGAVTQLIRKYVPPIKPERVLGTELTYRLPTEYSKKFAELLQDLDEKCAQLQLVGYGL 834
              :...||..:.|.:......|  ..:.||: .:..|.| ..:.:|:.|.::.......:..:|.
plant   849 SPEHEKDVETLVQEVSSNARKI--YHIAGTQ-KFEFPKE-EVRISEVFQAVENAKRNFTVFAWGF 909

  Fly   835 SGATLEDVFMAV 846
            :..||||||:.|
plant   910 ADTTLEDVFIKV 921

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6052	NP_649002.3	rim_protein	21..>54	CDD:130324	11/32 (34%)
		rim_protein	<149..1709	CDD:130324	211/828 (25%)
ABCA6	NP_001327229.1	rim_protein	<341..>923	CDD:130324	176/632 (28%)
		ABC_subfamily_A	614..835	CDD:213230	94/238 (39%)