Protein Alignment CG6052 and abcg4b

DIOPT Version :9

• Sequence 1: NP_649002.3
• Gene: CG6052 / 39971
• FlyBaseID: FBgn0036747
• Length: 1725
• Species: Drosophila melanogaster
• Sequence 2: NP_001104682.1
• Gene: abcg4b / 794238
• ZFINID: ZDB-GENE-080215-10
• Length: 644
• Species: Danio rerio
• Alignment Length: 610
• Identity: 136/610 - (22%)
• Similarity: 238/610 - (39%)
• Gaps: 137/610 - (22%)

  Fly   547 KNYGKLKAVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKP-TSGTAIVNG--YDIRTHLA 608
            |..|....:|.:|.|....|:..::|.:||||:|.:|::.|..:. .:|..:|||  .|.||.
Zfish    75 KKQGYKALLKCLSGKFSSRELIGIMGPSGAGKSTLMNILAGYRETGMTGQILVNGKLRDPRTF-- 137

  Fly   609 KARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVENEVGKYMTMLKLQDKSYVAAKNLS 673
              |:......|.:.|...:||::.::..:.||....::..:..:.:.:|.|.|.:..:....:||
Zfish   138 --RKMSCYIMQEDKLLPHLSVQEAMMVSANLKLNESSEVKKELIKEILTALGLHECVHTRTVSLS 200

  Fly   674 GGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQS-EKDGRTILLTTHYMDEADV-- 735
            ||..::|::...|..|..|:..|||:||:|:|....:..|::| .:.||||:.|.| ...|.:
Zfish   201 GGQCKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQGGRTIICTIH-QPSAKLFE 264

  Fly   736 LGDRIAILSEGKLQCQGTSFYLKKRFGTGYLLVCIMQSGCDVGAVTQLIRKYVPPIKPERVLGTE 800
            :.|::.|||:|:                     ||.:     |:|..|| .|:      |.||..
Zfish   265 MFDKLYILSQGQ---------------------CIYK-----GSVPYLI-PYL------RGLGLH 296

  Fly   801 L-TYRLPTEY-----SKKFAELLQDLDE-----KCAQLQLVGYGLSGATLEDVFMAVNTDKRVQG 854
            . ||..|.::     |.::.:|...|.|     .||             ||:....::.......
Zfish   297 CPTYHNPADFIIEVASGEYGDLNPVLFEAVQGGMCA-------------LEEKCNCIDKTTVTSC 348

  Fly   855 GAEGPPVDGSIDFKELVFDSKTREKRRIRRCFMFWQALFLKKFYTTTRNYWLLGIQLVLPIAVMA 919
            .|:.....|.::.......|.|:           :..||.:.|.|..|:..|..::|:..|::..
Zfish   349 AAKCVKDPGHVESHTFATSSLTQ-----------FCILFKRTFITICRDQVLTHLRLMSHISIGV 402

  Fly   920 LTILNSRGGRIYYELPAMPISINQYSSAYVVLEDNTTDKTSSLADAYSKHLEHYARRCTLLRTGD 984
            |.      |.:|..:.      |..|..:    :||.....|:.     .|...|...|:| |..
Zfish   403 LI------GLLYLNIG------NDASKVF----NNTGFLFFSML-----FLMFGALMPTVL-TFP 445

  Fly   985 LKFEDYILSHDVNHSRRIDFHFLAGLTVSENNF-----------IVWLNNKPLHTAPLTLNLLHN 1038
            |:...::..| :|:...:..::|| .|:::..|           :.|:..:|...:..   ||..
Zfish   446 LEMAVFLREH-LNYWYSLKAYYLA-KTMADIPFQVLCPIMYCSIVYWMTEQPPEASRY---LLFL 505

  Fly  1039 ALAI--KLLGQDASTYVTNEPLPYSDDTRTLRLNKGQVLGAEISINLSLTMCFITAFYAIPIIRE 1101
            ||:|  .|:.|.....|         ...:..|.....:|....|.:.|...|...|..||
Zfish   506 ALSICTALVAQSLGLLV---------GAASTSLQVATFVGPVTGIPVLLFSGFFVNFDTIP---- 557

  Fly  1102 RETRAKLLQFLSGVDVCAYWTSHIV 1126
                 :.||:.|.|....|....::
Zfish   558 -----EYLQWSSYVSYVRYGFEEVI 577

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6052	NP_649002.3	rim_protein	21..>54	CDD:130324
		rim_protein	<149..1709	CDD:130324	136/610 (22%)
abcg4b	NP_001104682.1	3a01204	42..644	CDD:273361	136/610 (22%)
		ABCG_EPDR	57..281	CDD:213180	62/236 (26%)
		ABC2_membrane	375..574	CDD:279410	51/243 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.000