Sequence 1: | NP_649002.3 | Gene: | CG6052 / 39971 | FlyBaseID: | FBgn0036747 | Length: | 1725 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_780419.2 | Gene: | Abca12 / 74591 | MGIID: | 2676312 | Length: | 2595 | Species: | Mus musculus |
Alignment Length: | 1850 | Identity: | 510/1850 - (27%) |
---|---|---|---|
Similarity: | 855/1850 - (46%) | Gaps: | 356/1850 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 LPVLFLCLILVLRIIVLPEKMDEIRYPTVSISDLNLYMRMVPLGNRILHENGSLNIPRNFLCYTP 110
Fly 111 NNPINSAIVGATAIRLRLLGTRAYDTALHME---QDMVLHNFLAG-VQFE-----------DNEN 160
Fly 161 VNTNDAGYPLNLNYSLRFPSELRTMQGPIIDTWRTSRLFL---SYDTSGSRNRLDNDGGVPVGYI 222
Fly 223 REGFLPIQHALTMSWLALASGVTDTGIPAIHLQRFPYRAYTYDQLLSGLRQLLPFVILLSFIYPA 287
Fly 288 STVTKYVTSEKELQLKEIMKLIGVHNWLHWVAWFVKSYIMLMLVVFLIMSLIMVKFYASVAVLTF 352
Fly 353 SSWVP----VLLFLH--TYVVTSVCLCFMLAVLFSKASTASAVAAIFWFLTYIPYSFGYYYYERL 411
Fly 412 SLMSKLLISLIFSNSALGFGIHVIVMWEGTGEGITWRNMFHPVSTDDSLTLFYIIMTMSFGSIMF 476
Fly 477 ISICLYVEQVFPGEYGVPRRWNFMCHKNYWRQ------------------YVPSLNIVPSFQTIL 523
Fly 524 HGSAKAKSCR---------RAREVGIQLFNLQKNYGKLKAVKGISLKMHRNEITVLLGHNGAGKT 579
Fly 580 TTINMITGIVKPTSGTAIVNGYDIRTHLAKARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRG 644
Fly 645 TKA-VENEVGKYMTMLKLQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRR 708
Fly 709 SLWDLLQSEKDGRTILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGTGYLLVCIMQS 773
Fly 774 G--------CDVGAVTQLIRKYVPPIKPERVLGTELTYRLP---TEYSKKFAELLQDLDEKCAQL 827
Fly 828 QLVGYGLSGATLEDVFMAVNTDKR----------VQGGAEGPPVDGSIDFKELVFDSKT---REK 879
Fly 880 RRIRR---------CFMFWQALFLKKFYTTTRNYWLLGIQLVLPIAVMAL-----TILNSRGGRI 930
Fly 931 YYELPAMP--ISINQYSSAYVVLEDNTTDKTSSL------------------------------- 962
Fly 963 -----------------ADAYSKHLEH---YARRCTLLRTGDLKFEDYILSHDVNH---SRRIDF 1004
Fly 1005 HFLAGLT---------VSENNFI--VWLNNKPLHTAPLTLNLLHN-ALAIKLLGQDASTY---VT 1054
Fly 1055 NEPLPYSDDTRTLRLNKGQVLGAEISINLSLTMCF--ITAFYAIPIIRERETRAKLLQFLSGVDV 1117
Fly 1118 CAYWTSHIVWDYLVFVLSALSSILTIAAFKEIGYITPLDLSRYFYMLLIFGFPGIMLSYAASGCF 1182
Fly 1183 SDAATGFTRISIINTLMGTGLFLMFMTLNFEAFQ------LKDVAEKLAWYFRLSPHYSLASSTH 1241
Fly 1242 SIHIGYNIRRGCSIGGIRKLPKQLRCRNVPICCDIPGYYGWRKPGVLVEI-------TYMIMLGS 1299
Fly 1300 TLFLLIVMHDAKVCNLIAEKLGNCFSKRKRVEGGTSIENDSVVAEQRVVREMINSGRKDVPLL-V 1363
Fly 1364 YKISKRY----RSKLAVKAISFHVPHAECFGLLGINGAGKTSTFKMLAGDEKITSGEAYI---DG 1421
Fly 1422 T--NISTHKVYRKIGYCPQFDALFEDLTGRETLNIYCLLRGVQRRHVTPICWGLAISFGFAKHMD 1484
Fly 1485 KQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSGMDPAARRQLWQIIGLIRTAGKSIVLTSHSM 1549
Fly 1550 DECEALCSRLAIMVDGEFKCLGSVQSLKNQFSKGLILKVKVKHKKKTFQRVVEDSSSSNDKKSIS 1614
Fly 1615 ETDLKFLQMASVMESSQADRILKVNRFISKEIPDAELKEEYNGLITYYIP-HSKTLSKIFQLLET 1678
Fly 1679 NSHKLNIEDYLIMQTRLEEIFLDFASKRDS 1708 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG6052 | NP_649002.3 | rim_protein | 21..>54 | CDD:130324 | 4/7 (57%) |
rim_protein | <149..1709 | CDD:130324 | 489/1743 (28%) | ||
Abca12 | NP_780419.2 | ABC2_membrane_3 | <1006..1267 | CDD:289468 | 63/283 (22%) |
NosY | <1108..1269 | CDD:224196 | 35/172 (20%) | ||
ZnuC | 1346..1570 | CDD:224046 | 98/223 (44%) | ||
ABC_subfamily_A | 1350..1565 | CDD:213230 | 94/214 (44%) | ||
ABC2_membrane_3 | <1913..2174 | CDD:289468 | 66/288 (23%) | ||
CcmA | 2253..2567 | CDD:224054 | 136/353 (39%) | ||
ABC_subfamily_A | 2254..2477 | CDD:213230 | 98/224 (44%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838438 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.840 |