DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6052 and abcg2a

DIOPT Version :9

Sequence 1:NP_649002.3 Gene:CG6052 / 39971 FlyBaseID:FBgn0036747 Length:1725 Species:Drosophila melanogaster
Sequence 2:XP_021325521.1 Gene:abcg2a / 735312 ZFINID:ZDB-GENE-050517-35 Length:644 Species:Danio rerio


Alignment Length:424 Identity:93/424 - (21%)
Similarity:158/424 - (37%) Gaps:106/424 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1391 LLGINGAGKTSTFKMLAG--DEKITSGEAYIDGT----NISTHKVYRKIGYCPQFDALFEDLTGR 1449
            :||..|:||:|...:||.  |....|||..|||.    |.....     ||..|.|.:...||.|
Zfish    73 ILGATGSGKSSFLDVLAARKDPAGLSGEVLIDGAPQPPNFKCLS-----GYVVQDDVVMGTLTVR 132

  Fly  1450 ETLNIYCLLR---GVQRRHVTPICWGLAISFGFAKHMDKQT-----KHYSGGNRRKLSTAISVLG 1506
            |.|.....||   .:::|........|....|.:|..|.:.     :..|||.|::.:..:.::.
Zfish   133 ENLRFSAALRLPKSIKQREKDEKVERLIQELGLSKVADSRVGTQLIRGVSGGERKRTNIGMELII 197

  Fly  1507 NPSVLYLDEPTSGMDPAARRQLWQIIGLIRTAGKSIVLTSHS-MDECEALCSRLAIMVDGEFKCL 1570
            :|.||:|||||:|:|.:....:..::..:...|::|:|:.|. ......|...|.::|.|:....
Zfish   198 DPPVLFLDEPTTGLDASTANSVLMLLKKMGNNGRTIILSIHQPRYSIYRLFDSLTLLVGGKLVYH 262

  Fly  1571 GSVQSLKNQFSK------------GLILKV-----KVKHKKKTFQRVVEDSSSSNDKKSISETDL 1618
            |..|...:.||:            ...|.|     ......|.::.||:....|:..|.|.:..:
Zfish   263 GPAQDALSYFSQIGYTCEPHNNPADFFLDVINGDSSAVTLNKLYEEVVDQDQLSSSLKGIEDRLV 327

  Fly  1619 KFLQMASVMESSQAD--RILKVNRFISKEIPDAE---------------LKEEYNGLI------- 1659
            :..|.:|:.:.:.||  ||::...:.::  |.:.               ||..:..|:       
Zfish   328 EEYQRSSIFQQTHADLQRIVQGQDYSTR--PKSRTITYSTSFCHQFHWVLKRTFRNLMLNPQTSV 390

  Fly  1660 ---------------------------------TYYIPHSKTLSKIFQL-LETNSHKLNIEDYLI 1690
                                             .::|..::..|.:... |.....||.:.:|:.
Zfish   391 AQIGVMIFLALVVGAIFFGVAENSSGIQNRMGALFFITTNQCFSSVSAAELFIAERKLFVHEYIS 455

  Fly  1691 MQTRLEEIFLDFASKRDSSDIFTKR-----IYSC 1719
            ...|:...||    .:..|||.|.|     |:||
Zfish   456 GYYRVSVYFL----SKILSDILTLRTIPAVIFSC 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6052NP_649002.3 rim_protein 21..>54 CDD:130324
rim_protein <149..1709 CDD:130324 85/407 (21%)
abcg2aXP_021325521.1 PRK10535 43..638 CDD:333000 93/424 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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