DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6052 and osy

DIOPT Version :10

Sequence 1:NP_649002.3 Gene:CG6052 / 39971 FlyBaseID:FBgn0036747 Length:1725 Species:Drosophila melanogaster
Sequence 2:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster


Alignment Length:336 Identity:82/336 - (24%)
Similarity:158/336 - (47%) Gaps:41/336 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1334 TSIENDSVVAEQR---VVREMINSGRKDVPLLVYKISKRYRS----KLAVKAISFHVPHAECFGL 1391
            |:..:|..:|.:|   :.:....:.|:...:.|.:..|.|.|    .:.:..::..||....:||
  Fly    18 TTANSDLDLAARRRLFISQPSTLATRRQQAVCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGL 82

  Fly  1392 LGINGAGKTSTFKMLAGDEKITSGEAYI-------DGTNISTHKVYRKIGYCPQFDALFEDLTGR 1449
            ||.:|.|||:....:.|..::.|||.::       .|:.:..    .:|||.||..||:.:.|.|
  Fly    83 LGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPG----PRIGYMPQEIALYGEFTMR 143

  Fly  1450 ETLNIYCLLRGVQRRHVTPICWGLAISFGFAKHMDKQTKHYSGGNRRKLSTAISVLGNPSVLYLD 1514
            |||..:.::..:.:..:......| :......:..|..|:.|||.:|::|.|:::|..|.:|.||
  Fly   144 ETLIYFGIISAMSKGDIEDRTEFL-LKLLNLPNASKFVKNLSGGQQRRVSLAVALLHEPELLILD 207

  Fly  1515 EPTSGMDPAARRQLW-QIIGLIRTAGKSIVLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKN 1578
            |||.|:||..|:.:| .::.:.:....::::|:|.:||| |....:.::..|:.....|...|:.
  Fly   208 EPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDEC-AQAHMIGLLRGGKMLAEESPDYLRQ 271

  Fly  1579 QFS----KGLILKVKV------KHKKKTFQRVVED---------SSSSNDKKSISETDLKFLQMA 1624
            |::    :.:.||:.|      :.:....|.:||.         :...:|::..:|...:|....
  Fly   272 QYNADSLEDVFLKLSVLQNMGKRRRSSIAQEIVEQVTVPAISNPALDMSDEQHAAEISGEFGDNI 336

  Fly  1625 SVMESSQADRI 1635
            | |.|:..|.|
  Fly   337 S-MSSAARDPI 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6052NP_649002.3 rim_protein 21..>54 CDD:130324
rim_protein <149..1709 CDD:130324 82/336 (24%)
osyNP_001034071.1 CcmA 50..285 CDD:440746 64/240 (27%)
YadH 578..773 CDD:440604
Blue background indicates that the domain is not in the aligned region.

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