Sequence 1: | NP_649002.3 | Gene: | CG6052 / 39971 | FlyBaseID: | FBgn0036747 | Length: | 1725 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038943368.1 | Gene: | Abca9 / 287788 | RGDID: | 1305931 | Length: | 1653 | Species: | Rattus norvegicus |
Alignment Length: | 1894 | Identity: | 458/1894 - (24%) |
---|---|---|---|
Similarity: | 793/1894 - (41%) | Gaps: | 488/1894 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 MW----KNWILQWNQKMQIVFALVLPVLFLCLILVLRIIVLPEKMDEIR-YPTVSISDLNLYMRM 85
Fly 86 VPLGNRILHENGSLNIPRNFLCYTPNNPINSAIVGATAIRLRLLGTRAYDTALHMEQDMVLHNFL 150
Fly 151 AG---VQFEDNENVNTNDAGYPLNLNYSL---------RFPSELRTMQGPIIDTWRTSRLFLSYD 203
Fly 204 TSGS----RNRLDNDGGVPVGYIREGFLPIQHALTMSWLALASGVTDTGIPAIHLQRFPYRAYTY 264
Fly 265 DQLLS---GLRQLLPFVI----------------LLSFIYPASTVTKYVTSEKELQLKEIMKLIG 310
Fly 311 VHNWLHWVAWFVKSYIMLMLVVFLIMSLIMVKFYASVAVLTFSSWVPVLLFLHTYVVTSVCLCFM 375
Fly 376 LAVLFSK---ASTASAVAAIFW--------------FLTYI-----PYSFGYYYYERLSLMSKLL 418
Fly 419 ISLIFSNSALGFGIHVIVMWEGTGEGITWRNMFHPVSTDDSL-TLFYIIMTMSFGSIMFISICLY 482
Fly 483 VEQVFPGEYGVPRRWNFMCHKNYWRQ--------------YVPSLN-----IVPSFQTILHGSAK 528
Fly 529 AKSCRRAREVGIQLFNLQKNY----GKLKAVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIV 589
Fly 590 KPTSGT-AIVNGYDIRTHLAKARESL-GICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVENEV 652
Fly 653 GKYMTMLKLQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQSE 717
Fly 718 KDGRTILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGTGYLLVCIMQSGCDVGAVTQ 782
Fly 783 LIRKYVPPIKPERVLGTELTYRLPTEYSKKFAELLQDLDEKCAQLQLVGYGLSGATLEDVFMAVN 847
Fly 848 TDKRVQGG--AEGPPV--------DGSIDFKELVFDSKTREKRRIRRCFMFWQALFLKKFYTTTR 902
Fly 903 NYWLLGIQLVLPIAVMALTILNSRGG----------------------RIYYELPAMPISINQY- 944
Fly 945 SSAYVVLEDNTT-----DKTSSLADAYSKHLEHYARRCTLLRTGDLKFEDYILSHDVNHSRRIDF 1004
Fly 1005 HFLAGLTV----SENNFIVWLNNKPLHTAPLTLNLLHNAL-----AIKLLGQDASTYVTNEPLPY 1060
Fly 1061 SDDTRTLRLNKGQVLGAEISINLSLTMCFITAFYAIPIIRERETRAKLLQFLSGVDVCAYWTSHI 1125
Fly 1126 VWDYLVF------------------VLSALSSILTIAAFKEIGYITPLDLSRYFYMLLIFGFPGI 1172
Fly 1173 MLSYAASGCFSD--------------------AATGFTRISIINTLMGT---------GLFLMFM 1208
Fly 1209 TLNFEAFQLKDVAE-KLAWYFRLSPHYSLASSTHSIHIGYNIRRGCSIGGIRKLPKQLR------ 1266
Fly 1267 -----CRNVPICCDIPGYYGWRKPGVLVEITYMIMLGSTLFLLIVMHDAKVCNLIAEKLGNCFSK 1326
Fly 1327 RKRVEGG-TSIENDSVVAEQRVVREMINSGRKDVPLLVYKISKRYRSKLAVKAISFHVPHAECFG 1390
Fly 1391 LLGINGAGKTSTFKMLAGDEKITSGEAYIDGTNISTHKVYRKIGYCPQFDALFEDLTGRETLNIY 1455
Fly 1456 CLLRGVQRRHVTPICWGLAISFGFAKHMDKQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSGM 1520
Fly 1521 DPAARRQLWQII-GLIRTAGKSIVLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKNQFSKGL 1584
Fly 1585 ILKVKVKHKKKTFQRVVEDSSSSNDKKSISETDLKFLQMASVMESSQADRILKVNRFISKEIPDA 1649
Fly 1650 ELKEEYNGLITYYIP--HSKTLSKIFQLLETNSHKLNIEDYLIMQTRLEEIFLDFASKRDSSDIF 1712
Fly 1713 TKRIYSCSW 1721 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG6052 | NP_649002.3 | rim_protein | 21..>54 | CDD:130324 | 7/31 (23%) |
rim_protein | <149..1709 | CDD:130324 | 433/1752 (25%) | ||
Abca9 | XP_038943368.1 | rim_protein | <207..1630 | CDD:130324 | 416/1657 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342296 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.750 |