Sequence 1: | NP_649002.3 | Gene: | CG6052 / 39971 | FlyBaseID: | FBgn0036747 | Length: | 1725 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006533124.3 | Gene: | Abca8a / 217258 | MGIID: | 2386846 | Length: | 1653 | Species: | Mus musculus |
Alignment Length: | 1858 | Identity: | 462/1858 - (24%) |
---|---|---|---|
Similarity: | 792/1858 - (42%) | Gaps: | 422/1858 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 LMWKNWILQWNQKMQIVFALVLPVLFLCLILVLRIIVLPEKMDEIRYPTVSISDLNLYMRMVPLG 89
Fly 90 NRILHENGSLNIPRNFLCYTPNNPINSAIVGATAIRLRLLGTRAYDTALHMEQDMVLHNFLAGVQ 154
Fly 155 FEDNENV-NTNDAGYPLNLNYSLRFPSELRTMQ---------GPII-----DTWRTSRLFLSYDT 204
Fly 205 SGSRNRLDNDGGVPVGYIREGFLPIQHA--------------------LTMSWLALASGVTDTGI 249
Fly 250 PAIHLQRFPYRAYTYDQLLSGLRQLLPFVILLSFIYPASTVTKY----VTSEKELQLKEIMKLIG 310
Fly 311 VHNWLHWVAWFVKSYIMLMLVVFL---IMSLIMVKFYASVAVLTFSSWVPVLLFLHTYVVTSVCL 372
Fly 373 CFMLAVLFSKASTASAVAAIFWFLTYIPYSFGY---YYYERLSLMSKLLISLIFSNSALGFGIHV 434
Fly 435 IVM----WEGTGEGITWRNMFHPVSTDDSLTLFYIIMTMSFGSIMFISICLYVEQVFPGEYGVPR 495
Fly 496 RWNFMCHKNYWRQYVPSLNIV-----------PSFQTI---LHGSAKAKSCRRAREVGIQLFNLQ 546
Fly 547 KNY----GKLKAVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSGTAIV--NGYDIRT 605
Fly 606 HLAKARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVENEVGKYMTMLKLQDKSYVAAK 670
Fly 671 NLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQSEKDGRTILLTTHYMDEADV 735
Fly 736 LGDRIAILSEGKLQCQGTSFYLKKRFGTGYLLVCIMQSGCDVGAVTQLIRKYVPPIKPERVLGTE 800
Fly 801 LTYRLPTEYSKKFAELLQDLDEKCAQLQLVGYGLSGATLEDVFMAVN------------TDKRVQ 853
Fly 854 GGAEGPPVDGSIDFKELVFDSKTREKRRIRRCFMFWQAL-------FLKKFYTTTRNYWLLGIQL 911
Fly 912 VLPIAVMALTILNSRGGRIY---------YEL------------PAMPISINQYSSAYVVLEDNT 955
Fly 956 TDKTSSLADAYSKHLEHYARRCTLLRTGDLKFEDYILSHDVNHSRR--IDFHFLAGLTVSEN--- 1015
Fly 1016 -NFIVWLNNKPLHTAPLTLNLLHNALAIKLLGQDASTYVTNEPLPYSDDTRTLRLNKGQVLGAEI 1079
Fly 1080 SINLSLTMCFITAFYAIPIIRERETRAKLLQFLSGVDVCAYWTSHIVWDYLVFVLSALSSILTIA 1144
Fly 1145 AFKEIGYITPLDLSRYFYMLLIFGFPGIMLSYAASGCFSDAATGFTRISII--NTLMGTGLF-LM 1206
Fly 1207 FMTLNF--EAFQLKDVAEKLAWYFRLSPHYSLASSTHSIHIGYNIRRGCSIGGIRKLPKQLRCRN 1269
Fly 1270 VPICCDIPGYYGWRKPGVLV-----EITYMIMLGSTL-FLLIVMHDAKVCNLIAEKLG------- 1321
Fly 1322 ----------NCFSKRKRVEGGTSIENDSVVAEQRV--VREMINSGRKDVPLLV-------YKIS 1367
Fly 1368 K-----RYRSKLAVKAISFHVPHAECFGLLGINGAGKTSTFKMLAGDEKITSGEAYIDGTNISTH 1427
Fly 1428 KVYRKIGYCPQFDALFEDLTGRETLNIYCLLRGVQRRHVTPICWGLAISFGFAKHMDKQTKHYSG 1492
Fly 1493 GNRRKLSTAISVLGNPSVLYLDEPTSGMDPAARRQLWQII-GLIRTAGKSIVLTSHSMDECEALC 1556
Fly 1557 SRLAIMVDGEFKCLGSVQSLKNQFSKGLILKVKVKHKKKTFQRVVEDSSSSNDKKSISETDLKFL 1621
Fly 1622 QMASVMESSQADRILKVNRFISKEIPDAELKEEYNGLITYYIPHS--KTLSKIFQLLETNSHKLN 1684
Fly 1685 IEDYLIMQTRLEEIFLDFASKRDSSDIFTKRI-YSCSW 1721 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG6052 | NP_649002.3 | rim_protein | 21..>54 | CDD:130324 | 6/28 (21%) |
rim_protein | <149..1709 | CDD:130324 | 429/1719 (25%) | ||
Abca8a | XP_006533124.3 | rim_protein | <258..1630 | CDD:130324 | 402/1565 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838403 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.750 |