DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6052 and ABCA13

DIOPT Version :9

Sequence 1:NP_649002.3 Gene:CG6052 / 39971 FlyBaseID:FBgn0036747 Length:1725 Species:Drosophila melanogaster
Sequence 2:XP_011513432.1 Gene:ABCA13 / 154664 HGNCID:14638 Length:5059 Species:Homo sapiens


Alignment Length:1729 Identity:506/1729 - (29%)
Similarity:834/1729 - (48%) Gaps:279/1729 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 LLGTRAYDTALHMEQDMVLHNFLAGVQFED---NENVNTNDAGYPLNLNYSLRFPSELRTMQGPI 189
            :|.|:|::.   ::|    ::|||.:.|.:   ::|..:.....|.:::|::| .:.|.:::..:
Human  3444 ILETKAHEL---LQQ----NSFLASIIFSNSLFDKNFRSESVKLPPHVSYTIR-TNVLYSVRTDV 3500

  Fly   190 I--DTWRTSRLFLSYDTSGSRNRLDNDGGVPVGYIREGFLPIQHALTMSWLALASGVTDTGIPAI 252
            :  .:|:.....|..|            |....|:   |.|:|..:..:.:.:.:| .:...||.
Human  3501 VKNPSWKFHPQNLPAD------------GFKYNYV---FAPLQDMIERAIILVQTG-QEALEPAA 3549

  Fly   253 HLQRFPYRAYTYDQLLSGLRQLLPFVILLSFIYPASTVTKYVTSEKELQLKEIMKLIGVHNWLHW 317
            ..|..||..:|.|..|:.:....|.:::|:::...:::.:.:..|:|:|::|.|:::|||..:|:
Human  3550 QTQAAPYPCHTSDLFLNNVGFFFPLIMMLTWMVSVASMVRKLVYEQEIQIEEYMRMMGVHPVIHF 3614

  Fly   318 VAWFVKSYIMLMLVVFLIMSLIMVKFYASVAVLTFSSWVPVLLFLHTYVVTSVCLCFMLAVLFSK 382
            :|||:::     :.|..|.|..:.....:..:...|:...|.|||..:.::.|.|.::|:..||:
Human  3615 LAWFLEN-----MAVLTISSATLAIVLKTSGIFAHSNTFIVFLFLLDFGMSVVMLSYLLSAFFSQ 3674

  Fly   383 ASTASAVAAIFWFLTYIPYSFGYYYYERLSLMSKLLISLIFSNSALGFGIHVIVMWEGTGEGITW 447
            |:||:...::.:.::::||......:.:||.:::..:.|: |.:|.|.|:..|...||...||.|
Human  3675 ANTAALCTSLVYMISFLPYIVLLVLHNQLSFVNQTFLCLL-STTAFGQGVFFITFLEGQETGIQW 3738

  Fly   448 RNMFHPVSTDDSLTLFYIIMTMSFGSIMFISICLYVEQVFPGEYGVPRRWNFMCHKNYW------ 506
            .||:..:. ...:|..::...:.|.|.::.....|:..:.||.:|:.:.|.|....:||      
Human  3739 NNMYQALE-QGGMTFGWVCWMILFDSSLYFLCGWYLSNLIPGTFGLRKPWYFPFTASYWKSVGFL 3802

  Fly   507 ---RQYVPSLNI-------------VPSFQTILHGSAKAKSCRRAREVGIQLFNLQKNY-GKLKA 554
               |||..|.::             :.:.:..|.|||.          |:.|.::.|.| |....
Human  3803 VEKRQYFLSSSLFFFNENFDNKGSSLQNREGELEGSAP----------GVTLVSVTKEYEGHKAV 3857

  Fly   555 VKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSGTAIVNGYDIRTHLAKARESLGICPQ 619
            |:.:||..:|::||.|||.|||||||.|:|:||:..|||||.|:||.:::|.|::.|..||:|||
Human  3858 VQDLSLTFYRDQITALLGTNGAGKTTIISMLTGLHPPTSGTIIINGKNLQTDLSRVRMELGVCPQ 3922

  Fly   620 NNILFKEMSVRDHIIFFSKLKGIRGT-KAVENEVGKYMTMLKLQDKSYVAAKNLSGGMKRKLSLC 683
            .:||...::||:|::.|:.:|..:.| |.:..:|.:.:..:.|....:...:.||||:||||||.
Human  3923 QDILLDNLTVREHLLLFASIKAPQWTKKELHQQVNQTLQDVDLTQHQHKQTRALSGGLKRKLSLG 3987

  Fly   684 CALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQSEKDGRTILLTTHYMDEADVLGDRIAILSEGKL 748
            .|..|.::.|:.|||:||:|...|.||||:|...::||||:.|||::|||:.|.||:|:|..|:|
Human  3988 IAFMGMSRTVVLDEPTSGVDPCSRHSLWDILLKYREGRTIIFTTHHLDEAEALSDRVAVLQHGRL 4052

  Fly   749 QCQGTSFYLKKRFGTGYLLVCIMQSGC-------DVGAVTQLIRKYVPPIKPERVLGTELTYRLP 806
            :|.|..|.||:.:|.|..|....|...       |:..||.||:.|:|....:...|:||||.:|
Human  4053 RCCGPPFCLKEAYGQGLRLTLTRQPSVLEAHDLKDMACVTSLIKIYIPQAFLKDSSGSELTYTIP 4117

  Fly   807 TEYSKKFAE-LLQDLDEKCAQLQLVGYGLSGATLEDVFM------------AVNTDKRVQG---- 854
            .:..|...: |.|.|||...||.|.|||:|..|||:||:            |:.|:..:|.    
Human  4118 KDTDKACLKGLFQALDENLHQLHLTGYGISDTTLEEVFLMLLQDSNKKSHIALGTESELQNHRPT 4182

  Fly   855 -------GAEGPP--VDGSIDFKELVFDSKTREKRRIRRCFMFWQA-LFLKKFYTTTRNYWLLGI 909
                   |:...|  |.|....:..|.....|..||..|......| |.|...:...    .:|:
Human  4183 GHLSGYCGSLARPATVQGVQLLRAQVAAILARRLRRTLRAGKSTLADLLLPVLFVAL----AMGL 4243

  Fly   910 QLVLPIAV----MALT----------ILNSRGG------RIY------YELPAMPISINQYSS-- 946
            .:|.|:|.    :.||          ..:|.||      |:.      .:||...::..|.:|  
Human  4244 FMVRPLATEYPPLRLTPGHYQRAETYFFSSSGGDNLDLTRVLLRKFRDQDLPCADLNPRQKNSSC 4308

  Fly   947 ------AYVVLEDN----TTDKTSSLADAYSKHLEHYARRCTLLRTGDLKFEDYILSHDVNHSRR 1001
                  ::...:|:    .....|:.|...:.||.|     |||.......|:|:|:.. ...|.
Human  4309 WRTDPFSHPEFQDSCGCLKCPNRSASAPYLTNHLGH-----TLLNLSGFNMEEYLLAPS-EKPRL 4367

  Fly  1002 IDFHFLAGLTV-SE----NNFI--------VWLNNKPLHTAPLTLNLLHNALAIKLLGQ--DAST 1051
            ..:.|  ||.: ||    |..|        ||.|.|..|:.|..||.|:|.:..:.|..  |...
Human  4368 GGWSF--GLKIPSEAGGANGNISKPPTLAKVWYNQKGFHSLPSYLNHLNNLILWQHLPPTVDWRQ 4430

  Fly  1052 Y-VTNEPLPYSDDTRTLRLNKGQVLGAEISINLSLTMCFITAFYAI------PIIRERETRAKLL 1109
            | :|....||..    ..||:.::|  |......:.:|.:..|..:      .::|:|...||.|
Human  4431 YGITLYSHPYGG----ALLNEDKIL--ESIRQCGVALCIVLGFSILSASIGSSVVRDRVIGAKRL 4489

  Fly  1110 QFLSGVDVCAYWTSHIVWDYLVFVLSALSSILTIAAFKEIGYITPLDLSRYFYMLLIFGFPGIML 1174
            |.:||:....||.::.::|.|.:::|....:..|.||:...:....:|:....:|.:||:..:..
Human  4490 QHISGLGYRMYWFTNFLYDMLFYLVSVCLCVAVIVAFQLTAFTFRKNLAATALLLSLFGYATLPW 4554

  Fly  1175 SYAASGCFSDAATGFTRISIINTLMGTGLFLM-----FMTLNFEAFQLKDVAEKLAWYFRLSPHY 1234
            .|..|..||.:...|.....:|.:.|....|:     .:.:..:|..|:::.:.|.|.|.:.|.:
Human  4555 MYLMSRIFSSSDVAFISYVSLNFIFGLCTMLITIMPRLLAIISKAKNLQNIYDVLKWVFTIFPQF 4619

  Fly  1235 SLASSTHSI---HIGYNIRRGCSIGGIRKLPKQLRCRNVPICCDIPGYYGWRKPGVLVEITYMIM 1296
            .|......:   .|.|::.....|..... |.::            .:.||    :.|::...  
Human  4620 CLGQGLVELCYNQIKYDLTHNFGIDSYVS-PFEM------------NFLGW----IFVQLASQ-- 4665

  Fly  1297 LGSTLFLL-IVMHDAKVCNLIAEKLGNCFSKRKRVEGGTSIENDSVV--AEQRVVREMINSGRKD 1358
             |:.|.|| :::|    .:|:....|:     ..::|......|:.|  .|:||.....|.   |
Human  4666 -GTVLLLLRVLLH----WDLLRWPRGH-----STLQGTVKSSKDTDVEKEEKRVFEGRTNG---D 4717

  Fly  1359 VPLLVYKISKRYR----SKLAVKAISFHVPHAECFGLLGINGAGKTSTFKMLAGDEKITSGEAYI 1419
            : |::|.:||.||    :.:||:.||..:|..|||||||:|||||::|||||.|:..:|||.|.|
Human  4718 I-LVLYNLSKHYRRFFQNIIAVQDISLGIPKGECFGLLGVNGAGKSTTFKMLNGEVSLTSGHAII 4781

  Fly  1420 -----DGTNIS---THKVYRKIGYCPQFDALFEDLTGRETLNIYCLLRGVQRRHVTPICWGLAIS 1476
                 |..::|   |..|.  ||||||.|||.|.|||.|.|..||.|||:.|:.:..:...|...
Human  4782 RTPMGDAVDLSSAGTAGVL--IGYCPQQDALDELLTGWEHLYYYCSLRGIPRQCIPEVAGDLIRR 4844

  Fly  1477 FGFAKHMDKQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSGMDPAARRQLWQIIGLIRTAGKS 1541
            .....|.||....||||.:||||||::::|.|.:|.||||:|||||.::|.|||.|......|.:
Human  4845 LHLEAHADKPVATYSGGTKRKLSTALALVGKPDILLLDEPSSGMDPCSKRYLWQTIMKEVREGCA 4909

  Fly  1542 IVLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKNQFSKGLILKVKVKHKKKTFQRVVEDSSS 1606
            .|||||||:||||||:||||||:|.||||||.|.:||:|..|..:||.:                
Human  4910 AVLTSHSMEECEALCTRLAIMVNGSFKCLGSPQHIKNRFGDGYTVKVWL---------------- 4958

  Fly  1607 SNDKKSISETDLKFLQMASVMESSQADRILKVNRFISKEIPDAELKEEYNGLITYYIPHS-KTLS 1670
                                  ..:|::...|:..:....|..:.|.::..|:.|::|.. ..|:
Human  4959 ----------------------CKEANQHCTVSDHLKLYFPGIQFKGQHLNLLEYHVPKRWGCLA 5001

  Fly  1671 KIFQLLETNSHKLNIEDYLIMQTRLEEIFLDFASKRDSS 1709
            .:|:::|.|...|||:.|.|.||.||::|::|||::..:
Human  5002 DLFKVIENNKTFLNIKHYSINQTTLEQVFINFASEQQQT 5040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6052NP_649002.3 rim_protein 21..>54 CDD:130324
rim_protein <149..1709 CDD:130324 502/1706 (29%)
ABCA13XP_011513432.1 rim_protein 3068..5049 CDD:130324 506/1729 (29%)
ABC_subfamily_A 3842..4062 CDD:213230 96/219 (44%)
ABC_subfamily_A 4719..4945 CDD:213230 118/227 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148386
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.850

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