Sequence 1: | NP_649002.3 | Gene: | CG6052 / 39971 | FlyBaseID: | FBgn0036747 | Length: | 1725 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011513432.1 | Gene: | ABCA13 / 154664 | HGNCID: | 14638 | Length: | 5059 | Species: | Homo sapiens |
Alignment Length: | 1729 | Identity: | 506/1729 - (29%) |
---|---|---|---|
Similarity: | 834/1729 - (48%) | Gaps: | 279/1729 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 128 LLGTRAYDTALHMEQDMVLHNFLAGVQFED---NENVNTNDAGYPLNLNYSLRFPSELRTMQGPI 189
Fly 190 I--DTWRTSRLFLSYDTSGSRNRLDNDGGVPVGYIREGFLPIQHALTMSWLALASGVTDTGIPAI 252
Fly 253 HLQRFPYRAYTYDQLLSGLRQLLPFVILLSFIYPASTVTKYVTSEKELQLKEIMKLIGVHNWLHW 317
Fly 318 VAWFVKSYIMLMLVVFLIMSLIMVKFYASVAVLTFSSWVPVLLFLHTYVVTSVCLCFMLAVLFSK 382
Fly 383 ASTASAVAAIFWFLTYIPYSFGYYYYERLSLMSKLLISLIFSNSALGFGIHVIVMWEGTGEGITW 447
Fly 448 RNMFHPVSTDDSLTLFYIIMTMSFGSIMFISICLYVEQVFPGEYGVPRRWNFMCHKNYW------ 506
Fly 507 ---RQYVPSLNI-------------VPSFQTILHGSAKAKSCRRAREVGIQLFNLQKNY-GKLKA 554
Fly 555 VKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSGTAIVNGYDIRTHLAKARESLGICPQ 619
Fly 620 NNILFKEMSVRDHIIFFSKLKGIRGT-KAVENEVGKYMTMLKLQDKSYVAAKNLSGGMKRKLSLC 683
Fly 684 CALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQSEKDGRTILLTTHYMDEADVLGDRIAILSEGKL 748
Fly 749 QCQGTSFYLKKRFGTGYLLVCIMQSGC-------DVGAVTQLIRKYVPPIKPERVLGTELTYRLP 806
Fly 807 TEYSKKFAE-LLQDLDEKCAQLQLVGYGLSGATLEDVFM------------AVNTDKRVQG---- 854
Fly 855 -------GAEGPP--VDGSIDFKELVFDSKTREKRRIRRCFMFWQA-LFLKKFYTTTRNYWLLGI 909
Fly 910 QLVLPIAV----MALT----------ILNSRGG------RIY------YELPAMPISINQYSS-- 946
Fly 947 ------AYVVLEDN----TTDKTSSLADAYSKHLEHYARRCTLLRTGDLKFEDYILSHDVNHSRR 1001
Fly 1002 IDFHFLAGLTV-SE----NNFI--------VWLNNKPLHTAPLTLNLLHNALAIKLLGQ--DAST 1051
Fly 1052 Y-VTNEPLPYSDDTRTLRLNKGQVLGAEISINLSLTMCFITAFYAI------PIIRERETRAKLL 1109
Fly 1110 QFLSGVDVCAYWTSHIVWDYLVFVLSALSSILTIAAFKEIGYITPLDLSRYFYMLLIFGFPGIML 1174
Fly 1175 SYAASGCFSDAATGFTRISIINTLMGTGLFLM-----FMTLNFEAFQLKDVAEKLAWYFRLSPHY 1234
Fly 1235 SLASSTHSI---HIGYNIRRGCSIGGIRKLPKQLRCRNVPICCDIPGYYGWRKPGVLVEITYMIM 1296
Fly 1297 LGSTLFLL-IVMHDAKVCNLIAEKLGNCFSKRKRVEGGTSIENDSVV--AEQRVVREMINSGRKD 1358
Fly 1359 VPLLVYKISKRYR----SKLAVKAISFHVPHAECFGLLGINGAGKTSTFKMLAGDEKITSGEAYI 1419
Fly 1420 -----DGTNIS---THKVYRKIGYCPQFDALFEDLTGRETLNIYCLLRGVQRRHVTPICWGLAIS 1476
Fly 1477 FGFAKHMDKQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSGMDPAARRQLWQIIGLIRTAGKS 1541
Fly 1542 IVLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKNQFSKGLILKVKVKHKKKTFQRVVEDSSS 1606
Fly 1607 SNDKKSISETDLKFLQMASVMESSQADRILKVNRFISKEIPDAELKEEYNGLITYYIPHS-KTLS 1670
Fly 1671 KIFQLLETNSHKLNIEDYLIMQTRLEEIFLDFASKRDSS 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG6052 | NP_649002.3 | rim_protein | 21..>54 | CDD:130324 | |
rim_protein | <149..1709 | CDD:130324 | 502/1706 (29%) | ||
ABCA13 | XP_011513432.1 | rim_protein | 3068..5049 | CDD:130324 | 506/1729 (29%) |
ABC_subfamily_A | 3842..4062 | CDD:213230 | 96/219 (44%) | ||
ABC_subfamily_A | 4719..4945 | CDD:213230 | 118/227 (52%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165148386 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.850 |