DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6052 and abca5

DIOPT Version :9

Sequence 1:NP_649002.3 Gene:CG6052 / 39971 FlyBaseID:FBgn0036747 Length:1725 Species:Drosophila melanogaster
Sequence 2:NP_001135599.1 Gene:abca5 / 100216156 XenbaseID:XB-GENE-1012902 Length:1639 Species:Xenopus tropicalis


Alignment Length:1900 Identity:457/1900 - (24%)
Similarity:795/1900 - (41%) Gaps:484/1900 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SEIYAVGDWDKLKLLMWKNWILQWNQKMQIVFALVLPVLFLCLILVLRIIVLPEKMDEIRYPTVS 75
            |||..||.|.:.|.|::||::::...|...:..::.|:::..:.|:...:|...|..|       
 Frog     3 SEIKDVGLWKQTKTLLYKNYLIKCRTKRDSIQEILYPIIWWLISLLWASMVEQSKHYE------- 60

  Fly    76 ISDLNLYMRMVPLGNRILHENGSLNIPRN---FLCYTPNNPINSAIVGATAIRLRLLGTRAYDTA 137
                       .:.|.:|   |.|:.|.:   .:.|||.:.|...|:..||       :..|.| 
 Frog    61 -----------AMPNTLL---GGLDGPSSRHLIIGYTPESNITQHIMAMTA-------SECYLT- 103

  Fly   138 LHMEQDMVLHNFLAGVQFEDNENVNTNDAGYPLN---------LNYSLRFPSELRTMQGPIIDTW 193
                 |:....:|      |.|::.|..:.:..:         ::|.|||.          :.:.
 Frog   104 -----DITFKPYL------DEEHMKTASSSFEEHFVGVVFDNAMSYKLRFS----------VYSV 147

  Fly   194 RTSRLFLS-------YDTSGSRNRLDNDGGVPVGYIREGFLPIQHALTMSWLALASGVTDTGIPA 251
            ..|.|:::       ::...|.            |....|..:|..:..|.:.:.:.        
 Frog   148 PDSTLYMTPREDCHLWNCEASE------------YFYSTFTYLQACIDSSMIKMKTN-------- 192

  Fly   252 IHLQRFPYRAYTYDQLLS------GLRQ----------LLPFVILLSFIYPASTVTKYVTSEKEL 300
                   |.|  :::|.|      |.::          |:...::::|.....:|..||..|||.
 Frog   193 -------YSA--WEELKSTRAVIMGEQEVIVVDTFYHALMSVFLVMAFSPLGYSVAFYVVFEKEK 248

  Fly   301 QLKEIMKLIGVHNWLHWVAWFVKSYIMLMLVVFLIMSLIMVKFYASVAVLTFSSWVPVLLFL--H 363
            ::||.|||:|:|:...|:.| |..|...:||:.|:|:::...|:      .||.....|:||  .
 Frog   249 KVKEFMKLMGLHDTAFWLPW-VLLYTGFILVISLVMAVVATTFF------PFSKSNCFLIFLLYA 306

  Fly   364 TYVVTSVCLCFMLAVLFSKASTASAV--------AAIFWFLTY---IPYSFGYYYYERLSLMSKL 417
            .|.::.|....|||.||..:..|.|:        .|:..|:..   .|.||.:::..        
 Frog   307 LYGISLVLFALMLAPLFKNSKRAGAIVFLSTLALGAVGIFIVLKEDFPKSFVWFFSP-------- 363

  Fly   418 LISLIFSNSALGFGIHVIVMWEGTGEGITWRNMFHPVSTDDSLTLFYIIMTMSFGSIMFISICLY 482
                 |.......||..::..|....|..:.::     .|....|....:.:...|:|::.:..|
 Frog   364 -----FCQCTFMIGIAQVLHLEDFQRGAQFTHL-----KDGPYPLVITFIFLVVDSVMYLLLATY 418

  Fly   483 VEQVFPGEYGVPRRWNFMCHKNYW----RQY-----------VPSLNIVPSFQTILHGSAKAKSC 532
            ::||.|||||:.:...|....:||    ::|           |....::......|||....:.|
 Frog   419 LDQVLPGEYGLRQSPFFFLKPSYWSKRKKRYGELNESYFDRAVDMSEVIEPVSAELHGKEAIRIC 483

  Fly   533 RRAREVGIQLFNLQKNYGKLKAVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSGTAI 597
            ...:       :.:||.....|::|::..::..:||.|:||:|.||||.:|::.|:..||.|.|.
 Frog   484 CICK-------SFRKNNKPRNALQGLTFDIYEGQITALVGHSGTGKTTLMNILCGLCPPTEGFAT 541

  Fly   598 VNGYDIR--THLAKARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVENEVGKYMTMLK 660
            |.|:.:.  ..:.:|.:..|||.|.:|.|..::|.:::..|:.|:|| ..|..|.|:.|.:..|.
 Frog   542 VYGHRVTDIDEIQEASKMTGICQQTDIFFDVLTVEENLHIFASLRGI-DEKTKEQEINKILFDLD 605

  Fly   661 LQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQSEKDGRTILL 725
            :|...:..|:.||.|.|||||:..|:.||.||:|.|||::|:|:..|.::||||:..|.....:.
 Frog   606 MQALKHNHARTLSIGQKRKLSVAIAVLGNPKVLLLDEPTAGMDSCSRHTVWDLLKKRKGKHVTVF 670

  Fly   726 TTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGTGYLLVCIMQSGCDVGAVTQLIRKYVPP 790
            :||.|:|||:|.||.|::|:|.|:|.|:|.:||.::|.||.|...::..|||.|::.||.:::..
 Frog   671 STHCMEEADILADRKAVISQGSLKCIGSSLFLKSKWGVGYRLSMDIKKPCDVDALSSLITQHISG 735

  Fly   791 IKPERVLGTELTYRLPTEYSKKFAELLQDLDEKCAQLQLVGYGLSGATLEDVFMAVNTDKRV--- 852
            ....:.....|.|.||.:...||..|...||.. :.|.::.||:|..||||||..:.|:..:   
 Frog   736 ASLMQQSENSLLYSLPLKDVSKFPGLFSALDSG-SDLGIITYGVSATTLEDVFFKLETEAEIDQT 799

  Fly   853 ----------------------QG----GAEGPP--VDGSIDFKELV-------FDSKTREKRRI 882
                                  ||    ..|..|  |.||..:|:.|       |.:..||.:..
 Frog   800 DGIFNQRNLEDEGKWKSMEDIEQGLLELSLESSPCSVTGSALWKQQVAAVAKLHFRNLHRESKSF 864

  Fly   883 R---RCFMFWQALFLKKFYTTTRNYWLLGI---QLVLPIAVMALTILNSRGGRIYYELPAMPISI 941
            |   .|.:|        |.......:.||:   |.:.||.:.|         .:|:..|      
 Frog   865 RCVCLCLLF--------FLVPQLTLYFLGLSYHQSLAPIRLSA---------DMYFSHP------ 906

  Fly   942 NQYSSAY---VVLEDNT-TDKTSSLADAYSKHLEHYARRCTLLRTGDLKFEDYILSHDVNHSRRI 1002
            .|.|..:   ::|:::| |:....|.:..|:.          ::...:...||:.:...|.:..:
 Frog   907 KQKSHKFLTSLLLQNSTGTNLDELLGNLNSQK----------IKVDLINGSDYMSASPHNAALNV 961

  Fly  1003 DFHFLAGLTVSENNFIVWLNNKPLHTAPLTLNLLHNALAIKLLGQDASTYVTNEPLPYSDDTRTL 1067
               ||:|   ....:....|:..:|:.|:.:|.:.|:| ::.||.:.|..|.|.|. |.|...| 
 Frog   962 ---FLSG---KHYTYEAIFNSSMVHSLPVLINTISNSL-LRQLGVNESIEVWNSPF-YQDFLHT- 1017

  Fly  1068 RLNKGQVLGAEISINLSLTMCFITAFYAIP------IIRERETRAKLLQF----LSGVDVCAYWT 1122
                          :..|...|:.|:..|.      |..|.....|:..:    ::|:...|||.
 Frog  1018 --------------SYGLDFYFLIAYLGIMTGMLPYIAMENAYNHKVKAYSQLKMAGLYPSAYWV 1068

  Fly  1123 SHIVWDYLVFVLSALSSILTIAAFKEIGYITPLDLSRYFYMLLIFGFPG-----IMLSYAASGCF 1182
            ...|.|..:|.|..|..:.::.|||     :.:||.....:.:||...|     ::|:|..|  |
 Frog  1069 GQAVVDIPLFFLMLLFMVGSMLAFK-----SGIDLHAGTVLAMIFCLIGYVPAVVLLTYVVS--F 1126

  Fly  1183 SDAATGFTR------------ISIINTLMGTGLFL----------MFMTLNFEAFQLKDVAEKLA 1225
            :......||            ||||  ::...:|.          :|.::.|..:.|...   |.
 Frog  1127 TYKLINDTRQWWSLIFAVTASISII--IIEAAIFFASSVTVTRLHVFFSIFFPVYPLLGC---LT 1186

  Fly  1226 WYFRLSPHYSLASSTHSIHIGYNIRRGCSIGGIRKLPKQLRCRNVPICCDIPGYYGWRKPGVLVE 1290
            .:.::|.:.:     ||           .:.|:.:|.:.|                     |.|.
 Frog  1187 CFIKMSRNLA-----HS-----------DVKGLTQLGRLL---------------------VAVF 1214

  Fly  1291 ITYMIMLGSTLFLLIVMH-DAKVCNLIAEKLGNCFSKRKRVEGGTSI------------------ 1336
            ..|:..|   :|.||:.: :.|.                   ||.||                  
 Frog  1215 APYVHFL---IFFLILRYLEMKY-------------------GGRSIRKDPVFRSQTKKTKPWKF 1257

  Fly  1337 ------ENDSVVAEQRVVREMINSGRKDVPLLVYK-------------ISKRYRSKLAVKAISFH 1382
                  |::.|..|:..|.|.:.....:.|:::..             :.|..| ||.|..:||.
 Frog  1258 AEVPEDEDEDVKVERARVGEYMAPDCNEKPMVLVSGLHKEQDQTGKTILGKAMR-KLVVNNVSFC 1321

  Fly  1383 VPHAECFGLLGINGAGKTSTFKMLAGDEKITSGEAYIDGTNISTHKVY--RKIGYCPQFDALFED 1445
            |...|..||:|.|||||::...|:.|..::.:|:..:.........:.  |.:||.||.:..:.:
 Frog  1322 VRKGETVGLVGPNGAGKSTLLNMMVGQSELNAGQILMGDPAAGEPGLSPPRFLGYSPQTNYFWPE 1386

  Fly  1446 LTGRETLNIYCLLRGVQRRHVTPICWGLAISFGFAKHMDKQTKHYSGGNRRKLSTAISVLGNPSV 1510
            :..:|.|..|..::|:....:..:...:..:.....|:.:..|..|.||:||||.|:|:||||.:
 Frog  1387 IKLQEHLETYGAIKGMGSNVLKEVTRRIVETLDLKDHLQEPAKKLSVGNQRKLSFALSMLGNPDI 1451

  Fly  1511 LYLDEPTSGMDPAARRQLWQIIGLIRTA--GK--SIVLTSHSMDECEALCSRLAIMVDGEFKCLG 1571
            :.|:||::||||..::.:|::   |||.  ||  :.|:|:|||:|.||:|.|:||||.|:.:.:|
 Frog  1452 VLLEEPSTGMDPKNKQIMWKV---IRTTLKGKEQAAVITTHSMEEAEAICDRVAIMVSGQLRYIG 1513

  Fly  1572 SVQSLKNQFSKGLILKVKVKHKKKTFQRVVEDSSSSNDKKSISETDLKFLQMASVMESSQADRIL 1636
            |||.||::|.:...|::|:..:.:: |.|                                    
 Frog  1514 SVQHLKSKFGRYFSLELKLDTRARS-QNV------------------------------------ 1541

  Fly  1637 KVNRFISKEI----PDAELKEEYNGLITYYIPHS--KTLSKIFQLLETNSHKLNIEDYLIMQTRL 1695
               .|:.|||    |:|..:|.::.|::|.:|..  ::||:.|..||......|||:|:..|..|
 Frog  1542 ---EFLHKEILQIFPNASHQESFSSLMSYKVPKEDVESLSQTFSKLEQVKQMYNIEEYIFSQATL 1603

  Fly  1696 EEIFLDFASKRDSSD 1710
            |::|::.|.:::..|
 Frog  1604 EQVFIELAKEQEEED 1618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6052NP_649002.3 rim_protein 21..>54 CDD:130324 6/32 (19%)
rim_protein <149..1709 CDD:130324 425/1756 (24%)
abca5NP_001135599.1 rim_protein <87..1616 CDD:130324 432/1791 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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