DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7484 and selenom

DIOPT Version :10

Sequence 1:NP_649000.1 Gene:CG7484 / 39969 FlyBaseID:FBgn0036745 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_840071.2 Gene:selenom / 352913 ZFINID:ZDB-GENE-030410-4 Length:151 Species:Danio rerio


Alignment Length:139 Identity:28/139 - (20%)
Similarity:52/139 - (37%) Gaps:33/139 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PAAQRTY----------AKAILEVC-TCKFRAYPQIQAFIQSGRPAKFPNLQIKYVRGLDPVVKL 119
            |:...||          |:|.:|.| . :.....:::||:....|. :.||.:|::.|.||.:.|
Zfish    11 PSVILTYEVNIEKLSGLARARVETCGGUQLNRMREVKAFVTQDIPL-YHNLVMKHIPGADPELVL 74

  Fly   120 LDASGKVQETLSITKWN-------------------TDTVEEFFETHLAKDG--AGKNSYSVVED 163
            |:...:..:.:.:::..                   .|.|.|.|....|||.  .|:.|.:...:
Zfish    75 LNHYYEELDRIPLSEMTRAEINKLLAELGFYKKDHPEDQVPEEFRFSPAKDSPFEGRQSSTAAPE 139

  Fly   164 ADGDDDEDY 172
            .....|..:
Zfish   140 TTEPSDSQH 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7484NP_649000.1 Sep15_SelM 74..148 CDD:462607 18/93 (19%)
selenomNP_840071.2 Sep15_SelM 30..104 CDD:462607 14/74 (19%)

Return to query results.
Submit another query.