DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYO18A and Mhc

DIOPT Version :9

Sequence 1:NP_001333694.1 Gene:MYO18A / 399687 HGNCID:31104 Length:2058 Species:Homo sapiens
Sequence 2:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster


Alignment Length:1930 Identity:489/1930 - (25%)
Similarity:872/1930 - (45%) Gaps:418/1930 - (21%)


- Green bases have known domain annotations that are detailed below.


Human   349 EEQIAAEEAWNETEKVWLV-HRDGFSLASQLKSEELNLPEGKVRVKLDHDGAILDVDEDDVEKAN 412
            :.:|...:.::..:..|:. .::|: |..::|:.:.::    |.|.| ..|.:.|:..:.|||.|
  Fly    23 QRRIDQSKPYDSKKSCWIPDEKEGY-LLGEIKATKGDI----VSVGL-QGGEVRDIKSEKVEKVN 81

Human   413 APSCDRLEDLASLVYLNESSVLHTLRQRYGASLLHTYAGPSLLVLGPRGAPAVYSEKVMHMFKGC 477
            .|..:::||:|.:..||...|||.|||||.|.|::||:|...:.:.|.....||:.:...|::|.
  Fly    82 PPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGK 146

Human   478 RREDMAPHIYAVAQTAYRAMLMSRQDQSIILLGSSGSGKTTSCQHLVQYLATIAGISGNKVFSVE 542
            ||.::.|||:|::..||..||.:..:||:::.|.||:|||.:.:.::.|.||:.........:..
  Fly   147 RRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKS 211

Human   543 KW----QALYT--LLEAFGNSPTIINGNATRFSQILSLDFDQAGQVASASIQTMLLEKLRVARRP 601
            |.    |.:.|  :||||||:.|:.|.|::||.:.:.:.|...|::|.|.|:|.||||.||..:.
  Fly   212 KGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQ 276

Human   602 ASEATFNVFYYLLA---------CGDGTLRTELHLNHLAENNVFGIVPLAKPEEKQKAAQQFSKL 657
            :.|.::::||.:::         |   .|...::..|:...   |.|.:|..::    |::||..
  Fly   277 SLERSYHIFYQIMSGSVPGVKDIC---LLTDNIYDYHIVSQ---GKVTVASIDD----AEEFSLT 331

Human   658 QAAMKVLGISPDEQKACWFILAAIYHLGAAGATKEAPEEQAEAAEAGRKQFARHEWAQKAAYLLG 722
            ..|..:||.:..|::..:.|.||:.|:|.....:...|||||  :.|.::..|      .:.|.|
  Fly   332 DQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAE--QDGEEEGGR------VSKLFG 388

Human   723 CSLEELSSAIFKHQHKGGTLQRSTSFRQGPEESGLGDGTGPKLSALECLEGMAAGLYSELFTLLV 787
            |...||...:.|.:.|.|    :....||.....:.:..|          .:..|::..||..||
  Fly   389 CDTAELYKNLLKPRIKVG----NEFVTQGRNVQQVTNSIG----------ALCKGVFDRLFKWLV 439

Human   788 SLVNRALKSSQHSLCSMMIVDTPGFQNPEQGGSARGASFEELCHNYTQDRLQRLFHERTFVQELE 852
            ...|..|.:.|.....:.::|..||:..|..|      ||:||.|:|.::||:.|:...||.|.|
  Fly   440 KKCNETLDTQQKRQHFIGVLDIAGFEIFEYNG------FEQLCINFTNEKLQQFFNHHMFVLEQE 498

Human   853 RYKEENIELAFDDLEPPTDDSVAAVDQASHQSLVRSLARTDEARGLLWLLEEEALVPGASEDTLL 917
            .||.|.|:.||.|...   |.:|.:|      |:      ::..|:|.:||||::.|.|::.|..
  Fly   499 EYKREGIDWAFIDFGM---DLLACID------LI------EKPMGILSILEEESMFPKATDQTFS 548

Human   918 ERLFSYYGPQEGDKKGQSPLLHSSKP-------HHFLLGHSHGTNWVEYNVTGWLNYTKQNPATQ 975
            |:|.:.:       .|:|......||       .||.:.|..|.  |.||:||||...| :|...
  Fly   549 EKLTNTH-------LGKSAPFQKPKPPKPGQQAAHFAIAHYAGC--VSYNITGWLEKNK-DPLND 603

Human   976 NAPRLLQDSQKKIISNLFLGRAGSATVLSGSIAGLEGGSQLALRRATSMRKTFTTGMAAVKKKSL 1040
            ......:.||.|::..:|...||.:           ||.:.|..........|.|..:|.|:   
  Fly   604 TVVDQFKKSQNKLLIEIFADHAGQS-----------GGGEQAKGGRGKKGGGFATVSSAYKE--- 654

Human  1041 CIQMKLQVDALIDTIKKSKLHFVHCFLPVAEGWAGEPRSASSRRVSSSSELDLPSGDHCEAGLLQ 1105
                  |:::|:.|::.::.|||.|.:|                    :|:..|.         .
  Fly   655 ------QLNSLMTTLRSTQPHFVRCIIP--------------------NEMKQPG---------V 684

Human  1106 LDVPLLRTQLRGSRLLDAMRMYRQGYPDHMVFSEFRRRFDVLAPHLTKKHGRNYIVVDERRAVEE 1170
            :|..|:..||..:.:|:.:|:.|:|:|:.|::.:|:.|:.::.|.|.:.      |..:::|.|.
  Fly   685 VDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMRYKIMCPKLLQG------VEKDKKATEI 743

Human  1171 LLECLDLEKSSCCMGLSRVFFRAGTLARLEEQRDEQTSRNLTLFQAACRGYLARQHFKKRKIQDL 1235
            :::.:||.:....:|.::||||||.|.::||.|||:..:.::..||..||||:|:.|||.:.|.:
  Fly   744 IIKFIDLPEDQYRLGNTKVFFRAGVLGQMEEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRV 808

Human  1236 AIRCVQKNIKKNKGVKDWPWWKLFTTVRPLIEVQLSEEQIRNKDEEIQQLRSKLEKAE------- 1293
            |::.||:|::|...::.|||:||:..|:||:.|...|       :||.:|..|.:|||       
  Fly   809 ALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRIE-------DEIARLEEKAKKAEELHAAEV 866

Human  1294 KERNELR-LNSDRLESRIS----------------ELTSELTDERNTGESASQLLDAETAERLRA 1341
            |.|.||. ||:..|..:.:                |..::||.::|..|  :||.|.:  |||..
  Fly   867 KVRKELEALNAKLLAEKTALLDSLSGEKGALQDYQERNAKLTAQKNDLE--NQLRDIQ--ERLTQ 927

Human  1342 E--------KEMKELQTQYDALKKQMEVMEMEVMEARLIRAAE------INGEVDDDD------- 1385
            |        ::.|:...:...|||.:|.:|:.|.:|...:|.:      :|.|:...|       
  Fly   928 EEDARNQLFQQKKKADQEISGLKKDIEDLELNVQKAEQDKATKDHQIRNLNDEIAHQDELINKLN 992

Human  1386 -----------AGGEWRLKYERAVREVDFTKKRLQQ---EFEDKLEVE-------QQNKRQLE-- 1427
                       ..||.....|..:..::..|.:|:|   |.||.||.|       :::||::|  
  Fly   993 KEKKMQGETNQKTGEELQAAEDKINHLNKVKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGD 1057

Human  1428 -----RRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQQVRNHELEKKQRRFDSELS 1487
                 ..:.||:.:.:|.::.:|:..|:...:||:|:|     |...|..|:.:.|:  ..:.:.
  Fly  1058 LKLTQEAVADLERNKKELEQTIQRKDKELSSITAKLED-----EQVVVLKHQRQIKE--LQARIE 1115

Human  1488 QAHEEAQREKLQREKLQREKDMLLAEAFSLKQQLEEKDMDIAGFTQKVVSL----EAEL----QD 1544
            :..||.:.|:..|.|.::::..|..|...|.::|||    ..|.|...:.|    ||||    :|
  Fly  1116 ELEEEVEAERQARAKAEKQRADLARELEELGERLEE----AGGATSAQIELNKKREAELSKLRRD 1176

Human  1545 ISSQESKDEASLAKVKK--------------QLRDLEAKVKDQEEE------------------- 1576
            :.....:.|::||.::|              ||..|:||.:.::.|                   
  Fly  1177 LEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEKEKNEYYGQLNDLRAGVDHITNEK 1241

Human  1577 --------------------LDEQAGTIQMLEQAKLRLEME-MERMRQTHSKEMESRDEEVEEAR 1620
                                |||...|:...:.:|.:|.:| .:.:||.  :|.||:..::.:.:
  Fly  1242 AAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSIENSDLLRQL--EEAESQVSQLSKIK 1304

Human  1621 QSCQKKLKQMEVQLEEEYEDKQKVLREKRELEGKLATLSDQVN---------------------- 1663
            .|...:|:..:...:||..::..:|.:.|.||..|..|.:||.                      
  Fly  1305 ISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQRQLSKANAEAQV 1369

Human  1664 -RRDFESE-----KRLRKDLKRTKALLADAQLMLDHL--------KNSAPSKREIAQLKNQLEES 1714
             |..:||:     :.|.:..::.:|.||:|:..::.|        |.......|:..|:.:::.:
  Fly  1370 WRSKYESDGVARSEELEEAKRKLQARLAEAEETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRA 1434

Human  1715 EFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRLEEDQEDMNELMK 1779
            .....||.|.:||.:..|.:..|::||:|....|.:::......|...::...||.||.:.    
  Fly  1435 NAIANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLE---- 1495

Human  1780 KHKAAVAQASRDLA-QINDLQAQLEEANKEKQELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKI 1843
                ||.:.:::|| ::.||..|:.|..:...|:::..:.|:::.:.|             :|.:
  Fly  1496 ----AVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDEL-------------QAAL 1543

Human  1844 RELETRLEFERTQVKRLESLASRLKENMEKLTEERDQRIAAENREKEQNKRLQRQLRDTKEEMGE 1908
            .|.|..||.|..:|.|.:...|::::.:::..:|:::..  ||..|..    ||.|...:..:..
  Fly  1544 EEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEF--ENTRKNH----QRALDSMQASLEA 1602

Human  1909 LARKEAEASRKKHELEMDLESLE-------AANQSLQADLKLAFKRIGDLQAAIEDEMES--DEN 1964
            .|:.:|||.|.|.:||.|:..||       .||...|.::|...:::.|:|.|:|:|..:  |..
  Fly  1603 EAKGKAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQRARDDAR 1667

Human  1965 EDL-INSEGDSDVDSELEDRVDGVKSWLSKNKGPSKAASDDGSLKSSSPTSYWKSLAPDRSDDEH 2028
            |.| |:....:.:.:|||:.    ::.|.:        :|.|..::.      :.||     |.|
  Fly  1668 EQLGISERRANALQNELEES----RTLLEQ--------ADRGRRQAE------QELA-----DAH 1709

Human  2029 DPLDNTSRPRYS---------------HSYLSDSDTEAKLTETNA 2058
            :.|:..|....|               ||.|.:...|||.:|..|
  Fly  1710 EQLNEVSAQNASISAAKRKLESELQTLHSDLDELLNEAKNSEEKA 1754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO18ANP_001333694.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
Interaction with actin 114..118
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..167
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1469..1499 6/29 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1871..1920 12/48 (25%)
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 9/42 (21%)
MYSc 81..777 CDD:214580 228/813 (28%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 214/782 (27%)
Myosin_tail_1 842..1897 CDD:279860 220/987 (22%)
V_Alix_like 1557..1877 CDD:187408 55/227 (24%)
ATP-synt_B <1671..1771 CDD:304375 22/107 (21%)
TMPIT 1739..>1825 CDD:285135 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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