DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7497 and ptgdr

DIOPT Version :9

Sequence 1:NP_001287100.1 Gene:CG7497 / 39966 FlyBaseID:FBgn0036742 Length:412 Species:Drosophila melanogaster
Sequence 2:XP_031747558.1 Gene:ptgdr / 100494338 XenbaseID:XB-GENE-989130 Length:338 Species:Xenopus tropicalis


Alignment Length:381 Identity:83/381 - (21%)
Similarity:140/381 - (36%) Gaps:136/381 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IIMVLGVFGNSLALFILARKKLN--KNSKYTLMLRCLATNNLV-----------------ALLGM 82
            ::...|..||.:|||||...||:  |.|.:.:::..|...||:                 :|:||
 Frog    24 LLFAAGFLGNLIALFILWLHKLHAKKTSVFYVLVTVLTVTNLMGKCLLCPVVQVAYFQNQSLVGM 88

  Fly    83 L-TTTLLKMYLSKEVLQSFIRVDCVGLVVWRFFGLSSGCIAAVMAAERWMALARPFIYHKHITYE 146
            . ...|.|::       .|:.:.|         ||:...|...||.:.|:||..||.|.::|..:
 Frog    89 TGNLNLCKVF-------GFLMIFC---------GLAPTFILLAMAVDCWLALGYPFFYQENINKK 137

  Fly   147 LIRKSINSILMIAVVITF------LPFVGFGAYIDESNPDQLKCIRYRD-APGVW---------N 195
            |      ::|:..::..|      |||.|||              ||:. .||.|         :
 Frog   138 L------ALLVSLILYVFCLGFCCLPFFGFG--------------RYKQYCPGTWCFIQMTAEES 182

  Fly   196 KTYAVLF-MVFGT---LLCIVIVACNLFVAHTLLCVIGRSRTAKRHMHYDLVSRDKNSAISIDPE 256
            .|.|:.: |::||   ||.:.||.|||.:...|               |.:..|:....|.    
 Frog   183 STSALAYSMLYGTIMGLLILAIVFCNLMIMKNL---------------YQMYKRENEKGIP---- 228

  Fly   257 SSSGTTLYQTQLSTGSGNSHRSVQPARQYRHSVSVTMAATDSSPVEIKFAKLMAFLSISFVICWM 321
                           |.|.....:||                ...|::...|:|.:::.|..|..
 Frog   229 ---------------SANFPNQQEPA----------------GMEELEHLILLAIMTVLFAACSF 262

  Fly   322 PQMIAIPLAIAPNRVPASNKFFIIADV----LTALHFTSDPYVYVLSRSKSINWSL 373
            |....:.:......   .|::   ||:    |.:::.|.||:::::.|:......|
 Frog   263 PLTARVYVGAFKGE---KNEY---ADLTVLRLLSVNSTLDPWIFIICRTSKFRGHL 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7497NP_001287100.1 7tm_4 36..>221 CDD:304433 60/223 (27%)
ptgdrXP_031747558.1 7tmA_PGD2 16..312 CDD:320268 82/379 (22%)
TM helix 1 18..42 CDD:320268 8/17 (47%)
TM helix 2 54..76 CDD:320268 3/21 (14%)
TM helix 3 96..118 CDD:320268 7/37 (19%)
TM helix 4 141..157 CDD:320268 2/15 (13%)
TM helix 5 186..209 CDD:320268 9/22 (41%)
TM helix 6 247..269 CDD:320268 5/21 (24%)
TM helix 7 279..304 CDD:320268 6/27 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I11154
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 65 1.000 Inparanoid score I5184
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D412827at33208
OrthoFinder 1 1.000 - - FOG0000857
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11866
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.070

Return to query results.
Submit another query.