DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment anchor and PIN8

DIOPT Version :9

Sequence 1:NP_001261995.1 Gene:anchor / 39965 FlyBaseID:FBgn0036741 Length:957 Species:Drosophila melanogaster
Sequence 2:NP_197014.1 Gene:PIN8 / 831362 AraportID:AT5G15100 Length:367 Species:Arabidopsis thaliana


Alignment Length:369 Identity:89/369 - (24%)
Similarity:151/369 - (40%) Gaps:59/369 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ALVQCFGIIICGYIAGR-FKIISNAETKGLGTFVGTFALPSLIFLSLVELNWSAVNWSFLLAMLV 116
            |.|..:..:..|:::.| .|:.|..:..|:..||..|::|.|.|..:.|.|...::...:|:.::
plant    13 ATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIISENNPFKMSPKLILSDIL 77

  Fly   117 SKAVVFFAVLIISLLVAR---PLNYARGGLMAIFCT------QSNDFAIGYPIVMALYKDVHPEY 172
            .|    |.|:::..:|.|   |.. .|||.:....|      ..|...:|.||:.|:|.|   |.
plant    78 QK----FLVVVVLAMVLRFWHPTG-GRGGKLGWVITGLSISVLPNTLILGMPILSAIYGD---EA 134

  Fly   173 ASYLYLMAPISLAILNPVGLVLMEIS------------------KIIKNKEDVTRNPPLCPETCP 219
            ||.|..:..:...|...:.|.|.|::                  :...|.||..:.     |...
plant   135 ASILEQIVVLQSLIWYTILLFLFELNAARALPSSGASLEHTGNDQEEANIEDEPKE-----EEDE 194

  Fly   220 AEQMSKRNRCLGERSILVFNTLIALFFNPLLLMTLLGVAGGFL-FPNG--LPEMVSSTLRVLGQS 281
            .|....|.|.:|...||: .....|..||....||:|:....| |..|  ||||:..::.:|...
plant   195 EEVAIVRTRSVGTMKILL-KAWRKLIINPNTYATLIGIIWATLHFRLGWNLPEMIDKSIHLLSDG 258

  Fly   282 FSATALFLLGLKIVGGTGSERKSI---GFLLPGVLILVKILVLPLVIRQTVNIMQSGQNFNDTTE 343
            ....|:|.|||.:     :.:.||   |..:..:.:|:|.::.|.:      ::.|.......:.
plant   259 GLGMAMFSLGLFM-----ASQSSIIACGTKMAIITMLLKFVLGPAL------MIASAYCIRLKST 312

  Fly   344 LSTFGFLYGTFPAAPGAFVIATQYNMEVELVARSMVFCTFISAP 387
            |.....|....|.....||.|.:||:..|:::..::|...|:.|
plant   313 LFKVAILQAALPQGVVPFVFAKEYNLHPEIISTGVIFGMLIALP 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
anchorNP_001261995.1 Mem_trans 53..387 CDD:304621 88/367 (24%)
DEP_GPR155 871..953 CDD:239890
PIN8NP_197014.1 Mem_trans 9..362 CDD:281537 89/369 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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